PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM06G00620.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 260aa MW: 28443.1 Da PI: 11.0519

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM06G00620.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	92.9	2.6e-29	179	229	2	52
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ OGLUM06G00620.1 179 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQN 229 9*************************************************7 PP
2	Myb_DNA-binding	48.5	2e-15	180	231	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+ + OGLUM06G00620.1 180 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQNTK 231 89***********************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MMELFPRQLD LSLHISTPSC FSPSPASAST TASSWPWTTK QQLPEEEEAA ATTSTTTSSR 60 SAPPLLLCNS DVFSTRGSST TNTNHHADGG LANSQQLKAA ARQPIHGIPV YHGHQQQQRR 120 QLHHPYDVVG TRQSDGGRRL FSHHVGVGVT PSRTLSSSSS SPVRLLPRLP PGRRSVRAPR 180 MRWTTTLHAR FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQNT KLSVDLETSM 240 LRLPGRPNLE FTLGIGKASQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	1e-28	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM06G00620.1