PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM06G06550.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 209aa    MW: 23044.6 Da    PI: 4.7673
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM06G06550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.11.9e-171564255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ++kGVr +  +g+WvAeIr p++   rkr++lg+++++e+Aa+a +aa  +l+g
  OGLUM06G06550.1 15 RHKGVRLRQ-WGKWVAEIRLPNS---RKRIWLGSYDSPEKAARAFDAAFICLRG 64
                     68****998.**********933...5*********************999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MQANTTQPAP EKERRHKGVR LRQWGKWVAE IRLPNSRKRI WLGSYDSPEK AARAFDAAFI  60
CLRGGEAIAG LNFPESPPAV VARTTDPREV LAFATSHANQ LLLLDAAIAQ EEEAHSFKKE  120
EEAQVEEKTA EESSDVVRAN AAPPPPVQVA GGSFDWSQLP LYSPTTTPAA EHWEEDNVEG  180
DIPVCSEMSV ETSSNSRYIG VVFQMHSYG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.14e-32ERF family protein