PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM06G07430.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bHLH

Protein Properties

Length: 69aa MW: 7332.43 Da PI: 9.1276

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM06G07430.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.8	2.6e-05	4	30	23	54
HHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 23 LrellPk.askapskKlsKaeiLekAveYIksL 54 L++l+P a +l+ a++Le+A++Y+k L OGLUM06G07430.1 4 LQRLVPGgA------RLDTASMLEEAIRYVKFL 30 777777744......9***************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 69 aa Download sequence
MRALQRLVPG GARLDTASML EEAIRYVKFL KGHVQSLERA AAALHMHGGH AAAAGFAGDA 60 VYSCPSYYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50330.1	5e-14	bHLH family protein

Link Out ? help Back to Top
Ensembl	OGLUM06G07430.1