PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM06G08570.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bHLH
Protein Properties Length: 72aa    MW: 8106.03 Da    PI: 7.7168
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM06G08570.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.40.000315311531
                     HHHHHHHHHHCTSCCC. CS
              HLH 15 riNsafeeLrellPkas 31
                     +iN+ +++L++llP++ 
  OGLUM06G08570.1 15 EINELISKLQSLLPNSR 31
                     7*************952 PP
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    
MSSRRSSRSS VSEEEINELI SKLQSLLPNS RRRGANQSLH REVDDLSDRL SDLMAGMDHN  60
SPGAEIIRSL LR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.13e-15bHLH family protein