PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM06G14810.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 372aa MW: 39342.3 Da PI: 9.5763

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM06G14810.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.5	3.5e-55	25	152	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtdeel+++yL +kv + +++ ++i+e+d++k+ePw+Lp+k+k +ekewyf+s rd+ky+tg r+nrat +gyWkatgkd+e+ s OGLUM06G14810.1 25 LPPGFRFHPTDEELITYYLLRKVVDGSFNG-RAIAEIDLNKCEPWELPEKAKMGEKEWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREIRS 117 79***********************999.89***********99999************************************9 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +g+lvg+kktLvfy+grapkg+kt+Wvmheyrl OGLUM06G14810.1 118 ArTGALVGMKKTLVFYRGRAPKGQKTQWVMHEYRL 152 868889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MERCSVLGLG GGGGGGGGGR LDGELPPGFR FHPTDEELIT YYLLRKVVDG SFNGRAIAEI 60 DLNKCEPWEL PEKAKMGEKE WYFYSLRDRK YPTGLRTNRA TGAGYWKATG KDREIRSART 120 GALVGMKKTL VFYRGRAPKG QKTQWVMHEY RLDGTYAYHF LSSSTRDEWV IARIFTKPGV 180 FPVVRKGRLG ISGGGGDTSC FSDSTSASVG GGGGTSASSA LRAPLAEASL FAAAAAPAQL 240 RRGXXXXXGG GSATATANLV TGLELVPCFS TTAHMDASFG TGQYNPAPLA VEPPPPPPAF 300 FPSLRSLQEN LQLPLFLSGG MQAGVSSQPL SGGGAFHWQS GMDVKVEGAV GRAPPQMAVG 360 PGQLDGAFAW GF

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MERCSVLGLG GGGGGGGGGR LDGELPPGFR FHPTDEELIT YYLLRKVVDG SFNGRAIAEI  60
DLNKCEPWEL PEKAKMGEKE WYFYSLRDRK YPTGLRTNRA TGAGYWKATG KDREIRSART  120
GALVGMKKTL VFYRGRAPKG QKTQWVMHEY RLDGTYAYHF LSSSTRDEWV IARIFTKPGV  180
FPVVRKGRLG ISGGGGDTSC FSDSTSASVG GGGGTSASSA LRAPLAEASL FAAAAAPAQL  240
RRGXXXXXGG GSATATANLV TGLELVPCFS TTAHMDASFG TGQYNPAPLA VEPPPPPPAF  300
FPSLRSLQEN LQLPLFLSGG MQAGVSSQPL SGGGAFHWQS GMDVKVEGAV GRAPPQMAVG  360
PGQLDGAFAW GF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	5e-92	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM06G14810.1