PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM06G19210.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

BES1

Protein Properties

Length: 355aa MW: 37335.2 Da PI: 8.4697

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM06G19210.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	209.3	1e-64	15	164	2	149
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspess 93 g++r ptw+ErEnn+rRERrRRaiaakiyaGLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ e+++ +g+sas sp+ss OGLUM06G19210.1 15 GGTRVPTWRERENNRRRERRRRAIAAKIYAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPPqaERPDPIGRSASPSPCSS 108 789*********************************************************************99999*********** PP DUF822 94 lqsslkssalaspvesysaspksssfpspssldsislasa........asllpvlsvlslvsss 149 +q +sp++sy++sp+sssfps+ s+++i++ + +sl+p+l++l+l+ss OGLUM06G19210.1 109 YQ--------PSPRASYNPSPASSSFPSSGSSSHITIGGNsliggvegSSLIPWLKTLPLSSSY 164 ........*************************98899*99*****99986664 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MTNGAGGGGG GGGLGGTRVP TWRERENNRR RERRRRAIAA KIYAGLRAYG NYNLPKHCDN 60 NEVLKALCNE AGWTVEPDGT TYRKGCKPPQ AERPDPIGRS ASPSPCSSYQ PSPRASYNPS 120 PASSSFPSSG SSSHITIGGN SLIGGVEGSS LIPWLKTLPL SSSYASSSKF PQLHHLYFNG 180 GSISAPVTPP SSSPTRTPRL RTDWENASVQ PPWASANYTS LPNSTPPSPG HKIAPDPAWL 240 AGFQISSAGP SSPTYNLVSP NPFGIFKEAI ASTSRVCTPG QSGTCSPVMG GMPAHHDVQM 300 VDGAPDDFAF GSSSNGNNES PGLVKAWEGE RIHEECASDE LELTLGSSKT RADPS

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MTNGAGGGGG GGGLGGTRVP TWRERENNRR RERRRRAIAA KIYAGLRAYG NYNLPKHCDN  60
NEVLKALCNE AGWTVEPDGT TYRKGCKPPQ AERPDPIGRS ASPSPCSSYQ PSPRASYNPS  120
PASSSFPSSG SSSHITIGGN SLIGGVEGSS LIPWLKTLPL SSSYASSSKF PQLHHLYFNG  180
GSISAPVTPP SSSPTRTPRL RTDWENASVQ PPWASANYTS LPNSTPPSPG HKIAPDPAWL  240
AGFQISSAGP SSPTYNLVSP NPFGIFKEAI ASTSRVCTPG QSGTCSPVMG GMPAHHDVQM  300
VDGAPDDFAF GSSSNGNNES PGLVKAWEGE RIHEECASDE LELTLGSSKT RADPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	4e-66	BES1 family protein

Link Out ? help Back to Top
Ensembl	OGLUM06G19210.1