PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM06G19730.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

TALE

Protein Properties

Length: 545aa MW: 55568 Da PI: 6.579

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM06G19730.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.4	2.4e-08	469	506	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe+ +yp+ +e+ LA++ gL+ +qV++WF N R + OGLUM06G19730.1 469 FENflRPYPKDSEKDMLAARSGLSRSQVSNWFINARVR 506 7766689*****************************88 PP
2	BELL	21.9	4.4e-08	339	404	10	72
BELL 10 akLlslleeVdkrYkqyveqlqtvissFeav...aglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +L +ll+ Vd++ +q+ve++q ++ F+ + +g g + +++A +a++ +r ++ ++++q+ OGLUM06G19730.1 339 QRLRKLLQLVDEKCNQCVEEMQSTAARFNSMvrsTGGGGGGLTAAFAGRAVAAAYRRVRRRVMGQL 404 578899999*****************9873446889999*******************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MSTSSNPSYH QLGLDAISCC FVAGGGGAEA AAPFFGFGFG DVDGEFLVAS PVAAVGDELA 60 CAVPLRRPQG SVSEEEVNAA AVAAAAAGGA ESCSTVPSVL GSVEFGCGTS SGVTIAQASR 120 MGRLAGEAPC GDAGGGGWIY GGSGIAPLHG AYYLSGFSSG AGAGFLSPFA ASSVAAAAPA 180 ASELSLRLGA TKCSSPSSMA NASSEVSCSG LTHVSSGGGL GYHQAAAAGA GAALFHPTHG 240 DGAAAAAAGE LRQAYHSRAP PHFSQVVSRS AVLAHVAQEL LNGFVACLLQ DVAADAASGV 300 DGGEASPALS SGFSARITTA PTEDASPGSG GARWAAEAQR LRKLLQLVDE KCNQCVEEMQ 360 STAARFNSMV RSTGGGGGGL TAAFAGRAVA AAYRRVRRRV MGQLVAAATA RSSSSAAAAA 420 LEEKERSWES SFIQKHWAMQ QLRRGDQQSW RPQRGLPEKS VAVLKAWMFE NFLRPYPKDS 480 EKDMLAARSG LSRSQVSNWF INARVRLWKP MIEDMYEELK KTSGGSDGAA EIEHLSSKDV 540 LSLES

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MSTSSNPSYH QLGLDAISCC FVAGGGGAEA AAPFFGFGFG DVDGEFLVAS PVAAVGDELA  60
CAVPLRRPQG SVSEEEVNAA AVAAAAAGGA ESCSTVPSVL GSVEFGCGTS SGVTIAQASR  120
MGRLAGEAPC GDAGGGGWIY GGSGIAPLHG AYYLSGFSSG AGAGFLSPFA ASSVAAAAPA  180
ASELSLRLGA TKCSSPSSMA NASSEVSCSG LTHVSSGGGL GYHQAAAAGA GAALFHPTHG  240
DGAAAAAAGE LRQAYHSRAP PHFSQVVSRS AVLAHVAQEL LNGFVACLLQ DVAADAASGV  300
DGGEASPALS SGFSARITTA PTEDASPGSG GARWAAEAQR LRKLLQLVDE KCNQCVEEMQ  360
STAARFNSMV RSTGGGGGGL TAAFAGRAVA AAYRRVRRRV MGQLVAAATA RSSSSAAAAA  420
LEEKERSWES SFIQKHWAMQ QLRRGDQQSW RPQRGLPEKS VAVLKAWMFE NFLRPYPKDS  480
EKDMLAARSG LSRSQVSNWF INARVRLWKP MIEDMYEELK KTSGGSDGAA EIEHLSSKDV  540
LSLES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	7e-49	TALE family protein

Link Out ? help Back to Top
Ensembl	OGLUM06G19730.1