PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM06G25550.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 256aa MW: 28576.7 Da PI: 6.789

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM06G25550.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.3	1.1e-30	18	71	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+eLH++Fveave LGG+++AtPk+il+lm+vkg++++h+kSHLQ+YR+ OGLUM06G25550.1 18 PRMRWTEELHRQFVEAVECLGGQDEATPKRILQLMGVKGVSISHIKSHLQMYRS 71 8****************************************************7 PP
2	Myb_DNA-binding	48.6	1.9e-15	19	70	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ ++v+av+ lGg t+k+I + mg kg + ++ks++q+y+ OGLUM06G25550.1 19 RMRWTEELHRQFVEAVECLGGQdeaTPKRILQLMGvKGVSISHIKSHLQMYR 70 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MGGFERRGVR QYNRSEVPRM RWTEELHRQF VEAVECLGGQ DEATPKRILQ LMGVKGVSIS 60 HIKSHLQMYR SGSSNSNHPV SLQKLTSATV NNISKREFVN SEDRCIYASE DRNTASSDKN 120 THTILRCGRS SMPSIEEIFR NWEQTRGRLL PWNSNVITTE QATRASRQTT NYSKPLKQLT 180 DCDLTLSIGQ LWEDAAGSDA DGSSTISEEV AAPSRDEAFV SSADDHFAAA AAKKKESNML 240 TTDLNLDLTI SSSWLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	2e-28	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM06G25550.1