PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM06G26910.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 186aa    MW: 19781 Da    PI: 6.5253
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM06G26910.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.3e-171665255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +y+GVr ++ +gr++AeIrdp    k++ ++lg+f++ae Aa+a++ a+++l+g
  OGLUM06G26910.1 16 RYRGVRKRP-SGRYAAEIRDPA---KKTPIWLGTFDSAEVAARAYDDAARSLRG 65
                     59*******.7*********83...36*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MRKSKQPQPQ PSPEIRYRGV RKRPSGRYAA EIRDPAKKTP IWLGTFDSAE VAARAYDDAA  60
RSLRGPTART NFPLAAPSAP PPRPPAAAAA TSSHSSTVES WSGGAPRAAA SALARSAAPM  120
EATQEEDCHS YCGSSSSVLC EDGSDDAAAS RTPLPFDLNM PPPEEELDMA AVADQMGIRY  180
DTLLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.11e-19ERF family protein