PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G08890.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

EIL

Protein Properties

Length: 462aa MW: 49904.8 Da PI: 8.3619

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G08890.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	45	2.6e-14	91	227	129	265
.XX----STTS-HHHHHHHHHHHSSSSSS-TTS--T..TT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGG CS EIN3 129 rsseshslselqDTtlgSLLsalmqhcdppqrrfpl..ekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmspt 220 rss +s l D l + + lm+ c ppq +pl + + pPWWPtG+e+ww+elg+ + ppy+ l ka k a +k + p+ OGLUM07G08890.1 91 RSSLAMAVSGLADHVLERMVKVLMRKCHPPQALYPLigKSPLRPPWWPTGREQWWPELGAGA--VVPPYRPAPLLSKAEKEVAVVAMVKNLVPD 182 5566667777888888888999***********95456799*********999764..468998899999986666788999** PP HHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX CS EIN3 221 ieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss 265 +e++ +r ++ ++++ e a+ + e++ + ++h OGLUM07G08890.1 183 FERLFMAVRMAPSVTSRITDAEARAWDDGVAGERETYMARHPHRT 227 ************************9999999888888888743 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MDASKKSVMT KEEQQLSPAA SPAAAVMTAE ADAINEEQDK AAAATTADHT APPPPPPPAA 60 AAVADHAGEM DMASGSGVAH LAPPAVAPAP RSSLAMAVSG LADHVLERMV KVLMRKCHPP 120 QALYPLIGKS PLRPPWWPTG REQWWPELGA GAVVPPYRPA PLLSKAEKEV AVVAMVKNLV 180 PDFERLFMAV RMAPSVTSRI TDAEARAWDD GVAGERETYM ARHPHRTTPT RAWKLMDSLK 240 PEAVRMKLKA PKPKPQVTIK VEDAAPFLTV SAAADPAAVE AAMGAIDAMR NSSKDPDAPY 300 YPMPSPLHGH NEVGPNDYPE NPAIWKEFNR KEGQLDLLRV GKKNDRMAIS DRVDGGASGS 360 GPRKGYLVMK TYKKAQEYYR ELRNKGAMAS GAGVKIEDDS ETESDNEDEK AKAKAKARAV 420 YQQNKGVKTE DQSETESDNE DEQAKVMAKA KARVIPRPNK GI

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MDASKKSVMT KEEQQLSPAA SPAAAVMTAE ADAINEEQDK AAAATTADHT APPPPPPPAA  60
AAVADHAGEM DMASGSGVAH LAPPAVAPAP RSSLAMAVSG LADHVLERMV KVLMRKCHPP  120
QALYPLIGKS PLRPPWWPTG REQWWPELGA GAVVPPYRPA PLLSKAEKEV AVVAMVKNLV  180
PDFERLFMAV RMAPSVTSRI TDAEARAWDD GVAGERETYM ARHPHRTTPT RAWKLMDSLK  240
PEAVRMKLKA PKPKPQVTIK VEDAAPFLTV SAAADPAAVE AAMGAIDAMR NSSKDPDAPY  300
YPMPSPLHGH NEVGPNDYPE NPAIWKEFNR KEGQLDLLRV GKKNDRMAIS DRVDGGASGS  360
GPRKGYLVMK TYKKAQEYYR ELRNKGAMAS GAGVKIEDDS ETESDNEDEK AKAKAKARAV  420
YQQNKGVKTE DQSETESDNE DEQAKVMAKA KARVIPRPNK GI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73730.1	2e-14	EIL family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G08890.1