PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G08910.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 607aa MW: 64404.5 Da PI: 3.8055

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G08910.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	81	2.5e-25	11	146	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk...dk 90 lppG+rF+Ptd elv+++L ++++gk+l+l+ vi e+d ++v Pw+L ++ +++ +e +fF++++ k+ +g+r++r + g W+ + + OGLUM07G08910.1 11 LPPGLRFDPTDGELVSRFLLRRLQGKPLPLNGVILEADPLSVPPWKLLAE-HGRGDEGFFFAQARAKNGKGSRQKRtVEGGGLWQGQRVcadGE 103 79**************************99***********744.4567799***************44558999665422222 PP NAM 91 evlsk.......kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++l+ + e v+ k L f+ ++ ++g ++ Wvmhey++ OGLUM07G08910.1 104 KLLVPdgggggvEVEIVWRKYLLSFF-AEGERG-SSGWVMHEYAV 146 33333566655444459999999999.444554.89*******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MAAGGGGADG LPPGLRFDPT DGELVSRFLL RRLQGKPLPL NGVILEADPL SVPPWKLLAE 60 HGRGDEGFFF AQARAKNGKG SRQKRTVEGG GLWQGQRVCA DGEKLLVPDG GGGGVEVEIV 120 WRKYLLSFFA EGERGSSGWV MHEYAVTSPA ELAASPIRLY RVRFSGHGKK RKREPQSGED 180 GVGRARAAPQ SAGTETALLE ERVMPPQPAP QSVGTEDALV EERIPPPQPV PIPPIAGTED 240 ALDVGTEDVR GRAAPQSAGT ESALLEECVL PPQTAPQITG TGVALLDEVV PPPQTVSISP 300 PAALVDAVDD ADCANQGCSG VMDDSTMVFS HLPDMITLPA EEGDAAGGAA LASMDYSWAD 360 FEYPEINMDE LPSCIDFTTT DPSCLDIELS MGNLHEPQST GIESDLLEEF VPQPQPVLVP 420 PLAALVEVAD SSEGPDQGCS VVMHDSSAVF THLSDPIVLP EEEEADRPDA PAGTMSLDYQ 480 NYSLSDFEFP EYPLLDVAGD ADGADQCSSN VMDDSSMVFS HLEDLITLPA EEAEADACSA 540 APAPSLDNQK YSSQGIIDSE APALSDFEFP ETIDEVLNSI NFTMADPSCL DMEFSMDDLL 600 DFDPPAD

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MAAGGGGADG LPPGLRFDPT DGELVSRFLL RRLQGKPLPL NGVILEADPL SVPPWKLLAE  60
HGRGDEGFFF AQARAKNGKG SRQKRTVEGG GLWQGQRVCA DGEKLLVPDG GGGGVEVEIV  120
WRKYLLSFFA EGERGSSGWV MHEYAVTSPA ELAASPIRLY RVRFSGHGKK RKREPQSGED  180
GVGRARAAPQ SAGTETALLE ERVMPPQPAP QSVGTEDALV EERIPPPQPV PIPPIAGTED  240
ALDVGTEDVR GRAAPQSAGT ESALLEECVL PPQTAPQITG TGVALLDEVV PPPQTVSISP  300
PAALVDAVDD ADCANQGCSG VMDDSTMVFS HLPDMITLPA EEGDAAGGAA LASMDYSWAD  360
FEYPEINMDE LPSCIDFTTT DPSCLDIELS MGNLHEPQST GIESDLLEEF VPQPQPVLVP  420
PLAALVEVAD SSEGPDQGCS VVMHDSSAVF THLSDPIVLP EEEEADRPDA PAGTMSLDYQ  480
NYSLSDFEFP EYPLLDVAGD ADGADQCSSN VMDDSSMVFS HLEDLITLPA EEAEADACSA  540
APAPSLDNQK YSSQGIIDSE APALSDFEFP ETIDEVLNSI NFTMADPSCL DMEFSMDDLL  600
DFDPPAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	1e-10	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G08910.1