PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G10870.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 219aa    MW: 22718.1 Da    PI: 8.9855
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G10870.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.7e-1773123255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      g+ GVr ++ +gr++AeIrd + ng   r++lg+f++ae Aa a+++a+++ +g
  OGLUM07G10870.1  73 GFIGVRKRP-WGRFAAEIRDSTRNG--VRVWLGTFDSAEAAAMAYDQAALSARG 123
                      789******.**********44465..***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MEQHSHCWYY GGGMAVTAAA GAGAASSTSS ESQPSGYDYE TAGSAEVSAP GGGAGRERAA  60
RKEEGGAGAA AAGFIGVRKR PWGRFAAEIR DSTRNGVRVW LGTFDSAEAA AMAYDQAALS  120
ARGAAAALNF PVERVRESLR ALALGAAGGS PVLALKGRHS KRKRRKRSEL AGATATANKT  180
TTTTSATTGG EHKQIVLELE DLGADYLEEL LWMSEQTSH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161166KRKRRK
2161167KRKRRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.11e-19ERF family protein