PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G10880.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 240aa    MW: 25534.2 Da    PI: 9.8115
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G10880.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.3e-1778127355
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      + GVr+++ +gr++AeIrd + ng  +r+++g+f++ae Aa a+++a+++ +g
  OGLUM07G10880.1  78 FIGVRRRP-WGRFAAEIRDSTRNG--ARVWIGTFDSAEAAAMAYDQAALSARG 127
                      57******.**********44465..***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MAEHFSHTGM YIGYTADAAA SFSSSSSSSS SSSSSEMLRF DTGWPDETPA PSSVAGRRRS  60
AGGDHRQGRG QTEAAAAFIG VRRRPWGRFA AEIRDSTRNG ARVWIGTFDS AEAAAMAYDQ  120
AALSARGAAA ALNFPVERVR ESLHALSLGA AGGSPVLALK RRHSKRKRRK KAELLAAAAA  180
TAATANATPQ TRRISKSTEL TTATTDEQKR FVVELEDLGA EYLEELLWLS EINGGSDPAD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161167RRHSKRK
2165170KRKRRK
3165171KRKRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-22ERF family protein