PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G13800.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

CAMTA

Protein Properties

Length: 921aa MW: 103221 Da PI: 7.7924

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G13800.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	166.7	3.7e-52	31	146	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 e +rw +++ei+aiL+n++++++++++ ++p sg+++Ly+rk+vr+frkDG++wkkkkdg+tv+E+hekLK+g+ e +++yYa++e++p+f OGLUM07G13800.1 31 AEaAARWFRPNEIYAILANHARFKIHAQPVDKPVSGTVVLYDRKVVRNFRKDGHNWKKKKDGRTVQEAHEKLKIGNEERVHVYYARGEDDPNFF 124 45589*************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylev 117 rrcywlL+++le+ivlvhy+++ OGLUM07G13800.1 125 RRCYWLLDKDLERIVLVHYRQT 146 *****************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 921 aa Download sequence
MAGAGGWDPL VGSEIHGFLT YPDLNYEKLV AEAAARWFRP NEIYAILANH ARFKIHAQPV 60 DKPVSGTVVL YDRKVVRNFR KDGHNWKKKK DGRTVQEAHE KLKIGNEERV HVYYARGEDD 120 PNFFRRCYWL LDKDLERIVL VHYRQTAEEN AMAPPNPEPE VADVPTVNLI HYTSPLTSAD 180 STSGHTELSL PEEINSHGGI SASSETGNHD SSLEEFWANL LESSIKNDPK VVTSACGGSF 240 VSSQQINNGP KNSGNIFNTS MASNAIPALN VVSETYATNH GLNQVNANHF GALKHQGDQT 300 QSLLASDVDS QSDQFISSSV KSPMDGNTSI PNEVPARQNS LGLWKYLDDD SPGLGDNPSS 360 VPQSFCPVTN ERLLEINEIS PEWAYSTETT KVVVIGNFYE QYKHLAGSAM FGVFGDQCVA 420 GDIVQTGVYR FMVGPHTPGK VDFYLTLDGK TPISEICSFT YHVMHGSSLE ARLPPSEDDY 480 KRTNLQMQMR LARLLFATNK KKIAPKLLVE GTKVANLMSA LSEKEWMDLW NILSDPEGTY 540 VPVTESLLEL VLRNRLQEWL VEMVMEGHKS TGRDDLGQGA IHLCSFLGYT WAIRLFSLSG 600 FSLDFRDSSG WTALHWAAYH GRERMVATLL SAGANPSLVT DPTPESPAGL TAADLAARQG 660 YDGLAAYLAE KGLTAHFEAM SLSKDTEQSP SKTRLTKLQS EKFEHLSEQE LCLKESLAAY 720 RNAADAASNI QAALRERTLK LQTKAIQLAN PEIEASEIVA AMKIQHAFRN YNRKKAMRAA 780 ARIQSHFRTW KMRRNFINMR RQVIRIQAAY RGHQVRRQYR KVIWSVGIVE KAILRWRKKR 840 KGLRGIASGM PVVMTVDAEA EPASTAEEDF FQAGRQQAED RFNRSVVRVQ ALFRSYKAQQ 900 EYRRMKIAHE EAKHDHLFIR L

Sequence ? help Back to Top

Protein Sequence Length: 921 aa Download sequence

MAGAGGWDPL VGSEIHGFLT YPDLNYEKLV AEAAARWFRP NEIYAILANH ARFKIHAQPV  60
DKPVSGTVVL YDRKVVRNFR KDGHNWKKKK DGRTVQEAHE KLKIGNEERV HVYYARGEDD  120
PNFFRRCYWL LDKDLERIVL VHYRQTAEEN AMAPPNPEPE VADVPTVNLI HYTSPLTSAD  180
STSGHTELSL PEEINSHGGI SASSETGNHD SSLEEFWANL LESSIKNDPK VVTSACGGSF  240
VSSQQINNGP KNSGNIFNTS MASNAIPALN VVSETYATNH GLNQVNANHF GALKHQGDQT  300
QSLLASDVDS QSDQFISSSV KSPMDGNTSI PNEVPARQNS LGLWKYLDDD SPGLGDNPSS  360
VPQSFCPVTN ERLLEINEIS PEWAYSTETT KVVVIGNFYE QYKHLAGSAM FGVFGDQCVA  420
GDIVQTGVYR FMVGPHTPGK VDFYLTLDGK TPISEICSFT YHVMHGSSLE ARLPPSEDDY  480
KRTNLQMQMR LARLLFATNK KKIAPKLLVE GTKVANLMSA LSEKEWMDLW NILSDPEGTY  540
VPVTESLLEL VLRNRLQEWL VEMVMEGHKS TGRDDLGQGA IHLCSFLGYT WAIRLFSLSG  600
FSLDFRDSSG WTALHWAAYH GRERMVATLL SAGANPSLVT DPTPESPAGL TAADLAARQG  660
YDGLAAYLAE KGLTAHFEAM SLSKDTEQSP SKTRLTKLQS EKFEHLSEQE LCLKESLAAY  720
RNAADAASNI QAALRERTLK LQTKAIQLAN PEIEASEIVA AMKIQHAFRN YNRKKAMRAA  780
ARIQSHFRTW KMRRNFINMR RQVIRIQAAY RGHQVRRQYR KVIWSVGIVE KAILRWRKKR  840
KGLRGIASGM PVVMTVDAEA EPASTAEEDF FQAGRQQAED RFNRSVVRVQ ALFRSYKAQQ  900
EYRRMKIAHE EAKHDHLFIR L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G13800.1