PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G14360.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 311aa    MW: 34319.2 Da    PI: 4.8806
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G14360.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM148.82.8e-46321602125
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                       pGfrFhPtdeelv++yL++k++gk+l++ e+ike+diyk++P+d+  +++ ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++s
  OGLUM07G14360.1  32 LPGFRFHPTDEELVTFYLRRKIAGKRLSI-EIIKEMDIYKHDPSDFLkTSTVGSEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPICS 124
                      69***************************.89*************96345556789************************************** PP

              NAM  95 k.....kgelvglkktLvfykgrapkgektdWvmhe 125
                      +     +g  +glkk+Lv+y+g+a kg+ktdW+mhe
  OGLUM07G14360.1 125 AataaaGGDCIGLKKSLVYYRGSAGKGTKTDWMMHE 160
                      9777666666*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MKRGCEDELG AGDVILRGVE EVEEEEDDEL VLPGFRFHPT DEELVTFYLR RKIAGKRLSI  60
EIIKEMDIYK HDPSDFLKTS TVGSEKEWYF FCLRGRKYRN SIRPNRVTGS GFWKATGIDR  120
PICSAATAAA GGDCIGLKKS LVYYRGSAGK GTKTDWMMHE NITHKKQPQP QLAVAAAPAP  180
APVPDATSSI TGSLESDSAG DDVVEYMNTL QPPPPPPPAS NVNGGYSNQH YFQEQWNSSS  240
NDNTTVFHQH AAAPPPEPSP ATAMAGFGHD QSVLSSPAPS DFYYKDGCND DIYRMVMELA  300
DPSLFYDHIY A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.11e-64NAC family protein