PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G14740.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 207aa    MW: 21753.5 Da    PI: 9.3615
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G14740.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM41.73.5e-13111434127
              NAM   4 Gfr..FhPtdeelvveyLkkkvegkkleleev..ikev.diykvePwdLpk.....kvkaeekewyfFskrdkkya...tgkrknratksgy.W 83 
                      Gfr  F P+d++l+++ L++k+++ +++   +  +++v d + + P +L +       +a+ + wyfFs r ++ a   +++ + ra+  g+ W
  OGLUM07G14740.1  11 GFRipFLPSDSDLLDCLLRPKIASGRVDSRFAplVHDVaDAFALPPAQLAAthapaPGAAGAEAWYFFSARPRARAragSNRAAARAVGGGRrW 104
                      6665599******************96553322599999**********843455422337789******99988832223345566667766* PP

              NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                       + g +k+v        g  + + + + +a+  +  +W+m ey 
  OGLUM07G14740.1 105 CSVGAKKAVEG-----GGYCQRFRYKERTASGVVAPRWMMVEYG 143
                      *****999987.....57889999998888888899*******6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MAPLADPAAE GFRIPFLPSD SDLLDCLLRP KIASGRVDSR FAPLVHDVAD AFALPPAQLA  60
ATHAPAPGAA GAEAWYFFSA RPRARARAGS NRAAARAVGG GRRWCSVGAK KAVEGGGYCQ  120
RFRYKERTAS GVVAPRWMMV EYGVAQEHDG EGVAQEHCGE GVAELVLCKI FRSPEPSRRP  180
ESGSPSSSSS ASASPSCSGG RKRKAAE