PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G17270.2
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bHLH
Protein Properties Length: 288aa    MW: 31894.7 Da    PI: 7.341
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G17270.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.3e-11128175454
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      ++  rE+ RRd++N++f eL  +l +    + +K++K++iL  A++ + +L
  OGLUM07G17270.2 128 SKACREKVRRDKLNERFLELGAVLEPG---KTPKMDKSSILNDAIRVMAEL 175
                      6789**********************9...9**************998777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MASPEGSTWV FDCPLMDDLA AAAGFDAAPA GGFYWTTPAP PQAALQPPPP PQQQQQHVAP  60
ATAAPNTCLV VLFFMYLLLY IIMTYGILKY KFIFFTSAEI NGSVDCEHGK EQPTNKRPRS  120
ESGTRPSSKA CREKVRRDKL NERFLELGAV LEPGKTPKMD KSSILNDAIR VMAELRSEAQ  180
KLKESNESLQ EKIKELKAEK NELRDEKQKL KAEKESLEQQ IKFLNARPSF VPHPPVIPAT  240
AFTAPQGQAA GQKLMMPVIG YPGFPMWQFM PPSDVDTTDD TKSCPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.15e-77bHLH family protein