PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G18780.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 425aa    MW: 45092.3 Da    PI: 7.3239
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G18780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.72.7e-54291571128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++++
  OGLUM07G18780.1  29 LPPGFRFHPTDEELVVHYLKKKAASVPLPV-TIIAEVDLYKFDPWELPEKANFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMA 121
                      79****************************.89***************99999***************************************** PP

              NAM  95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +  ++e+vg+kk Lvfy+g+ pkg+kt+W+mheyrl
  OGLUM07G18780.1 122 SgsTREKVGVKKALVFYRGKPPKGVKTNWIMHEYRL 157
                      9777788***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MESPDSSSGS APPRVLRRQQ QQPGSAPELP PGFRFHPTDE ELVVHYLKKK AASVPLPVTI  60
IAEVDLYKFD PWELPEKANF GEQEWYFFSP RDRKYPNGAR PNRAATSGYW KATGTDKPIM  120
ASGSTREKVG VKKALVFYRG KPPKGVKTNW IMHEYRLTDT SSSAAAVATT RRPPPPITGG  180
SRGAVSLRLD DWVLCRIYKK TNKAGAGQRS MECEDSVEDA VAAYAPSSQQ HATAAAGMAG  240
SDGAGGVAAA HGGDYSSLLH HDSHEDTFLV NGLLTAEDAA GLSTGASSLS QLAAAARAAA  300
TPCDATKQLL APSPTPFNWF EAFLPRAKEF PGGLSRSSRD IGDMSLSSTV DRSLSEAGAV  360
AIDTGDAANG ANTMPAFINP LGVQGATYQQ HQAIMGASLP SESAAAAAAC NFQHPFQLSR  420
VNWDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.19e-89NAC family protein