PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G22660.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

CAMTA

Protein Properties

Length: 1032aa MW: 115102 Da PI: 5.8618

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G22660.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	180.4	2.1e-56	21	137	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 l+ ++rwl+++ei++iL n++k++++ e+++rp sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYah+een++fq OGLUM07G22660.1 21 LEAQNRWLRPTEICHILSNYKKFSIAPEPPNRPASGSLFLFDRKILRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQ 114 5679**************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylevk 118 rr+ywlLee + +ivlvhylevk OGLUM07G22660.1 115 RRTYWLLEEGFMNIVLVHYLEVK 137 ******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1032 aa Download sequence
MAEVRKYGLP NQPPDIPQIL LEAQNRWLRP TEICHILSNY KKFSIAPEPP NRPASGSLFL 60 FDRKILRYFR KDGHNWRKKK DGKTVKEAHE KLKVGSVDVL HCYYAHGEEN ENFQRRTYWL 120 LEEGFMNIVL VHYLEVKGGK QSFSRSKEAE ESAGLSNADS PACSNSFASQ SQVASQSMDA 180 ESPISGQISE YEDAETDNCR ASSRYHPFVE MQQPVDGVMM NNMLGVSAPR YHGEMQTTTA 240 NSDNHFATHY DIAGVFNEAG AGLRGVSKTL HDSVRFAEPY PEYSAEFMKP ALYSSNATME 300 SNNLDDNSRL ETFMSEALYT NNLTQKEADA LSAAGIMSSQ AENNSYTDGI RYPLLKQSSL 360 DLFKIEPDGL KKFDSFSRWM SSELPEVADL DIKSSSDAFW SSTETVNVAD GTSIPINEQL 420 DAFAVSPSLS QDQLFSIIDV SPSYACTGSR NKVLITGTFL ANKEHVENCK WSCMFGDVEV 480 PAEVLAHGSL RCYTPVHLSG RVPFYVTCSN RVACSEVREF EFRDSDARQM DTSDPQTTGI 540 NEMHLHIRLE KLLSLGPDDY EKYVMSDGKE KSEIINTISS LMLDDKCLNQ AVPLDEKEVS 600 TARDQNIEKL VKEKLYCWLV HKVHDEDKGP NVLGKEGQGV IHLVAALGYD WAVRPIITAG 660 VKVNFRDARG WTALHWAASC GRERTVGALI ANGAESGLLT DPTPQFPAGR TAADLASENG 720 HKGIAGFLAE SALTSHLSAL TLKESKDGNV KEICGLGGAE DFAESSSSQL AYRDSQAESL 780 KDSLSAVRKS TQAAARIFQA FRVESFHRKK VVEYGDDDCG LSDEHTLSLV SIKNAKPGQN 840 DGAHSAAVRI QNKFRGWKGR KEFMIIRQKI VKIQAHVRGH QVRKSYRRIV WSVGIVEKII 900 LRWRRKRRGL RGFQPVKQLE GPSPIQQLEG PSQIQTAKEE EEDEYDYLKD GRKQAEGRLQ 960 RALARVKSMT QYPEAREQYS RIANRVTELQ EPQAMMIQDD MQSDGAIADG GDFMAELEEL 1020 CGDGDAPMPT IL

Sequence ? help Back to Top

Protein Sequence Length: 1032 aa Download sequence

MAEVRKYGLP NQPPDIPQIL LEAQNRWLRP TEICHILSNY KKFSIAPEPP NRPASGSLFL  60
FDRKILRYFR KDGHNWRKKK DGKTVKEAHE KLKVGSVDVL HCYYAHGEEN ENFQRRTYWL  120
LEEGFMNIVL VHYLEVKGGK QSFSRSKEAE ESAGLSNADS PACSNSFASQ SQVASQSMDA  180
ESPISGQISE YEDAETDNCR ASSRYHPFVE MQQPVDGVMM NNMLGVSAPR YHGEMQTTTA  240
NSDNHFATHY DIAGVFNEAG AGLRGVSKTL HDSVRFAEPY PEYSAEFMKP ALYSSNATME  300
SNNLDDNSRL ETFMSEALYT NNLTQKEADA LSAAGIMSSQ AENNSYTDGI RYPLLKQSSL  360
DLFKIEPDGL KKFDSFSRWM SSELPEVADL DIKSSSDAFW SSTETVNVAD GTSIPINEQL  420
DAFAVSPSLS QDQLFSIIDV SPSYACTGSR NKVLITGTFL ANKEHVENCK WSCMFGDVEV  480
PAEVLAHGSL RCYTPVHLSG RVPFYVTCSN RVACSEVREF EFRDSDARQM DTSDPQTTGI  540
NEMHLHIRLE KLLSLGPDDY EKYVMSDGKE KSEIINTISS LMLDDKCLNQ AVPLDEKEVS  600
TARDQNIEKL VKEKLYCWLV HKVHDEDKGP NVLGKEGQGV IHLVAALGYD WAVRPIITAG  660
VKVNFRDARG WTALHWAASC GRERTVGALI ANGAESGLLT DPTPQFPAGR TAADLASENG  720
HKGIAGFLAE SALTSHLSAL TLKESKDGNV KEICGLGGAE DFAESSSSQL AYRDSQAESL  780
KDSLSAVRKS TQAAARIFQA FRVESFHRKK VVEYGDDDCG LSDEHTLSLV SIKNAKPGQN  840
DGAHSAAVRI QNKFRGWKGR KEFMIIRQKI VKIQAHVRGH QVRKSYRRIV WSVGIVEKII  900
LRWRRKRRGL RGFQPVKQLE GPSPIQQLEG PSQIQTAKEE EEDEYDYLKD GRKQAEGRLQ  960
RALARVKSMT QYPEAREQYS RIANRVTELQ EPQAMMIQDD MQSDGAIADG GDFMAELEEL  1020
CGDGDAPMPT IL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.1	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G22660.1