PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G22660.2

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

CAMTA

Protein Properties

Length: 1038aa MW: 115736 Da PI: 5.863

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G22660.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	180.4	2.2e-56	21	137	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 l+ ++rwl+++ei++iL n++k++++ e+++rp sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYah+een++fq OGLUM07G22660.2 21 LEAQNRWLRPTEICHILSNYKKFSIAPEPPNRPASGSLFLFDRKILRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQ 114 5679**************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylevk 118 rr+ywlLee + +ivlvhylevk OGLUM07G22660.2 115 RRTYWLLEEGFMNIVLVHYLEVK 137 ******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1038 aa Download sequence
MAEVRKYGLP NQPPDIPQIL LEAQNRWLRP TEICHILSNY KKFSIAPEPP NRPASGSLFL 60 FDRKILRYFR KDGHNWRKKK DGKTVKEAHE KLKVGSVDVL HCYYAHGEEN ENFQRRTYWL 120 LEEGFMNIVL VHYLEVKGGK QSFSRSKEAE ESAGLSNADS PACSNSFASQ SQVASQSMDA 180 ESPISGQISE YEDAETEKFG ATDNCRASSR YHPFVEMQQP VDGVMMNNML GVSAPRYHGE 240 MQTTTANSDN HFATHYDIAG VFNEAGAGLR GVSKTLHDSV RFAEPYPEYS AEFMKPALYS 300 SNATMESNNL DDNSRLETFM SEALYTNNLT QKEADALSAA GIMSSQAENN SYTDGIRYPL 360 LKQSSLDLFK IEPDGLKKFD SFSRWMSSEL PEVADLDIKS SSDAFWSSTE TVNVADGTSI 420 PINEQLDAFA VSPSLSQDQL FSIIDVSPSY ACTGSRNKVL ITGTFLANKE HVENCKWSCM 480 FGDVEVPAEV LAHGSLRCYT PVHLSGRVPF YVTCSNRVAC SEVREFEFRD SDARQMDTSD 540 PQTTGINEMH LHIRLEKLLS LGPDDYEKYV MSDGKEKSEI INTISSLMLD DKCLNQAVPL 600 DEKEVSTARD QNIEKLVKEK LYCWLVHKVH DEDKGPNVLG KEGQGVIHLV AALGYDWAVR 660 PIITAGVKVN FRDARGWTAL HWAASCGRER TVGALIANGA ESGLLTDPTP QFPAGRTAAD 720 LASENGHKGI AGFLAESALT SHLSALTLKE SKDGNVKEIC GLGGAEDFAE SSSSQLAYRD 780 SQAESLKDSL SAVRKSTQAA ARIFQAFRVE SFHRKKVVEY GDDDCGLSDE HTLSLVSIKN 840 AKPGQNDGAH SAAVRIQNKF RGWKGRKEFM IIRQKIVKIQ AHVRGHQVRK SYRRIVWSVG 900 IVEKIILRWR RKRRGLRGFQ PVKQLEGPSP IQQLEGPSQI QTAKEEEEDE YDYLKDGRKQ 960 AEGRLQRALA RVKSMTQYPE AREQYSRIAN RVTELQEPQA MMIQDDMQSD GAIADGGDFM 1020 AELEELCGDG DAPMPTIL

Sequence ? help Back to Top

Protein Sequence Length: 1038 aa Download sequence

MAEVRKYGLP NQPPDIPQIL LEAQNRWLRP TEICHILSNY KKFSIAPEPP NRPASGSLFL  60
FDRKILRYFR KDGHNWRKKK DGKTVKEAHE KLKVGSVDVL HCYYAHGEEN ENFQRRTYWL  120
LEEGFMNIVL VHYLEVKGGK QSFSRSKEAE ESAGLSNADS PACSNSFASQ SQVASQSMDA  180
ESPISGQISE YEDAETEKFG ATDNCRASSR YHPFVEMQQP VDGVMMNNML GVSAPRYHGE  240
MQTTTANSDN HFATHYDIAG VFNEAGAGLR GVSKTLHDSV RFAEPYPEYS AEFMKPALYS  300
SNATMESNNL DDNSRLETFM SEALYTNNLT QKEADALSAA GIMSSQAENN SYTDGIRYPL  360
LKQSSLDLFK IEPDGLKKFD SFSRWMSSEL PEVADLDIKS SSDAFWSSTE TVNVADGTSI  420
PINEQLDAFA VSPSLSQDQL FSIIDVSPSY ACTGSRNKVL ITGTFLANKE HVENCKWSCM  480
FGDVEVPAEV LAHGSLRCYT PVHLSGRVPF YVTCSNRVAC SEVREFEFRD SDARQMDTSD  540
PQTTGINEMH LHIRLEKLLS LGPDDYEKYV MSDGKEKSEI INTISSLMLD DKCLNQAVPL  600
DEKEVSTARD QNIEKLVKEK LYCWLVHKVH DEDKGPNVLG KEGQGVIHLV AALGYDWAVR  660
PIITAGVKVN FRDARGWTAL HWAASCGRER TVGALIANGA ESGLLTDPTP QFPAGRTAAD  720
LASENGHKGI AGFLAESALT SHLSALTLKE SKDGNVKEIC GLGGAEDFAE SSSSQLAYRD  780
SQAESLKDSL SAVRKSTQAA ARIFQAFRVE SFHRKKVVEY GDDDCGLSDE HTLSLVSIKN  840
AKPGQNDGAH SAAVRIQNKF RGWKGRKEFM IIRQKIVKIQ AHVRGHQVRK SYRRIVWSVG  900
IVEKIILRWR RKRRGLRGFQ PVKQLEGPSP IQQLEGPSQI QTAKEEEEDE YDYLKDGRKQ  960
AEGRLQRALA RVKSMTQYPE AREQYSRIAN RVTELQEPQA MMIQDDMQSD GAIADGGDFM  1020
AELEELCGDG DAPMPTIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.1	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G22660.2