PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G22660.3

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

CAMTA

Protein Properties

Length: 1049aa MW: 116765 Da PI: 5.9321

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G22660.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	180.4	2.2e-56	21	137	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 l+ ++rwl+++ei++iL n++k++++ e+++rp sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYah+een++fq OGLUM07G22660.3 21 LEAQNRWLRPTEICHILSNYKKFSIAPEPPNRPASGSLFLFDRKILRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQ 114 5679**************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylevk 118 rr+ywlLee + +ivlvhylevk OGLUM07G22660.3 115 RRTYWLLEEGFMNIVLVHYLEVK 137 ******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1049 aa Download sequence
MAEVRKYGLP NQPPDIPQIL LEAQNRWLRP TEICHILSNY KKFSIAPEPP NRPASGSLFL 60 FDRKILRYFR KDGHNWRKKK DGKTVKEAHE KLKVGSVDVL HCYYAHGEEN ENFQRRTYWL 120 LEEGFMNIVL VHYLEVKGGK QSFSRSKEAE ESAGLSNADS PACSNSFASQ SQVASQSMDA 180 ESPISGQISE YEDAETGLAV SLSSVSKEKF GATDNCRASS RYHPFVEMQQ PVDGVMMNNM 240 LGVSAPRYHG EMQTTTANSD NHFATHYDIA GVFNEAGAGL RGVSKTLHDS VRFAEPYPEY 300 SAEFMKPALY SSNATMESNN LDDNSRLETF MSEALYTNNL TQKEADALSA AGIMSSQAEN 360 NSYTDGIRYP LLKQSSLDLF KIEPDGLKKF DSFSRWMSSE LPEVADLDIK SSSDAFWSST 420 ETVNVADGTS IPINEQLDAF AVSPSLSQDQ LFSIIDVSPS YACTGSRNKV LITGTFLANK 480 EHVENCKWSC MFGDVEVPAE VLAHGSLRCY TPVHLSGRVP FYVTCSNRVA CSEVREFEFR 540 DSDARQMDTS DPQTTGINEM HLHIRLEKLL SLGPDDYEKY VMSDGKEKSE IINTISSLML 600 DDKCLNQAVP LDEKEVSTAR DQNIEKLVKE KLYCWLVHKV HDEDKGPNVL GKEGQGVIHL 660 VAALGYDWAV RPIITAGVKV NFRDARGWTA LHWAASCGRE RTVGALIANG AESGLLTDPT 720 PQFPAGRTAA DLASENGHKG IAGFLAESAL TSHLSALTLK ESKDGNVKEI CGLGGAEDFA 780 ESSSSQLAYR DSQAESLKDS LSAVRKSTQA AARIFQAFRV ESFHRKKVVE YGDDDCGLSD 840 EHTLSLVSIK NAKPGQNDGA HSAAVRIQNK FRGWKGRKEF MIIRQKIVKI QAHVRGHQVR 900 KSYRRIVWSV GIVEKIILRW RRKRRGLRGF QPVKQLEGPS PIQQLEGPSQ IQTAKEEEED 960 EYDYLKDGRK QAEGRLQRAL ARVKSMTQYP EAREQYSRIA NRVTELQEPQ AMMIQDDMQS 1020 DGAIADGGDF MAELEELCGD GDAPMPTIL

Sequence ? help Back to Top

Protein Sequence Length: 1049 aa Download sequence

MAEVRKYGLP NQPPDIPQIL LEAQNRWLRP TEICHILSNY KKFSIAPEPP NRPASGSLFL  60
FDRKILRYFR KDGHNWRKKK DGKTVKEAHE KLKVGSVDVL HCYYAHGEEN ENFQRRTYWL  120
LEEGFMNIVL VHYLEVKGGK QSFSRSKEAE ESAGLSNADS PACSNSFASQ SQVASQSMDA  180
ESPISGQISE YEDAETGLAV SLSSVSKEKF GATDNCRASS RYHPFVEMQQ PVDGVMMNNM  240
LGVSAPRYHG EMQTTTANSD NHFATHYDIA GVFNEAGAGL RGVSKTLHDS VRFAEPYPEY  300
SAEFMKPALY SSNATMESNN LDDNSRLETF MSEALYTNNL TQKEADALSA AGIMSSQAEN  360
NSYTDGIRYP LLKQSSLDLF KIEPDGLKKF DSFSRWMSSE LPEVADLDIK SSSDAFWSST  420
ETVNVADGTS IPINEQLDAF AVSPSLSQDQ LFSIIDVSPS YACTGSRNKV LITGTFLANK  480
EHVENCKWSC MFGDVEVPAE VLAHGSLRCY TPVHLSGRVP FYVTCSNRVA CSEVREFEFR  540
DSDARQMDTS DPQTTGINEM HLHIRLEKLL SLGPDDYEKY VMSDGKEKSE IINTISSLML  600
DDKCLNQAVP LDEKEVSTAR DQNIEKLVKE KLYCWLVHKV HDEDKGPNVL GKEGQGVIHL  660
VAALGYDWAV RPIITAGVKV NFRDARGWTA LHWAASCGRE RTVGALIANG AESGLLTDPT  720
PQFPAGRTAA DLASENGHKG IAGFLAESAL TSHLSALTLK ESKDGNVKEI CGLGGAEDFA  780
ESSSSQLAYR DSQAESLKDS LSAVRKSTQA AARIFQAFRV ESFHRKKVVE YGDDDCGLSD  840
EHTLSLVSIK NAKPGQNDGA HSAAVRIQNK FRGWKGRKEF MIIRQKIVKI QAHVRGHQVR  900
KSYRRIVWSV GIVEKIILRW RRKRRGLRGF QPVKQLEGPS PIQQLEGPSQ IQTAKEEEED  960
EYDYLKDGRK QAEGRLQRAL ARVKSMTQYP EAREQYSRIA NRVTELQEPQ AMMIQDDMQS  1020
DGAIADGGDF MAELEELCGD GDAPMPTIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G22660.3