PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G22660.5

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

CAMTA

Protein Properties

Length: 1010aa MW: 112778 Da PI: 6.37

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G22660.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	180.4	2.1e-56	21	137	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 l+ ++rwl+++ei++iL n++k++++ e+++rp sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYah+een++fq OGLUM07G22660.5 21 LEAQNRWLRPTEICHILSNYKKFSIAPEPPNRPASGSLFLFDRKILRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQ 114 5679**************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylevk 118 rr+ywlLee + +ivlvhylevk OGLUM07G22660.5 115 RRTYWLLEEGFMNIVLVHYLEVK 137 ******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1010 aa Download sequence
MAEVRKYGLP NQPPDIPQIL LEAQNRWLRP TEICHILSNY KKFSIAPEPP NRPASGSLFL 60 FDRKILRYFR KDGHNWRKKK DGKTVKEAHE KLKVGSVDVL HCYYAHGEEN ENFQRRTYWL 120 LEEGFMNIVL VHYLEVKGGK QSFSRSKEAE ESAGLSNADS PACSNSFAKK FGATDNCRAS 180 SRYHPFVEMQ QPVDGVMMNN MLGVSAPRYH GEMQTTTANS DNHFATHYDI AGVFNEAGAG 240 LRGVSKTLHD SVRFAEPYPE YSAEFMKPAL YSSNATMESN NLDDNSRLET FMSEALYTNN 300 LTQKEADALS AAGIMSSQAE NNSYTDGIRY PLLKQSSLDL FKIEPDGLKK FDSFSRWMSS 360 ELPEVADLDI KSSSDAFWSS TETVNVADGT SIPINEQLDA FAVSPSLSQD QLFSIIDVSP 420 SYACTGSRNK VLITGTFLAN KEHVENCKWS CMFGDVEVPA EVLAHGSLRC YTPVHLSGRV 480 PFYVTCSNRV ACSEVREFEF RDSDARQMDT SDPQTTGINE MHLHIRLEKL LSLGPDDYEK 540 YVMSDGKEKS EIINTISSLM LDDKCLNQAV PLDEKEVSTA RDQNIEKLVK EKLYCWLVHK 600 VHDEDKGPNV LGKEGQGVIH LVAALGYDWA VRPIITAGVK VNFRDARGWT ALHWAASCGR 660 ERTVGALIAN GAESGLLTDP TPQFPAGRTA ADLASENGHK GIAGFLAESA LTSHLSALTL 720 KESKDGNVKE ICGLGGAEDF AESSSSQLAY RDSQAESLKD SLSAVRKSTQ AAARIFQAFR 780 VESFHRKKVV EYGDDDCGLS DEHTLSLVSI KNAKPGQNDG AHSAAVRIQN KFRGWKGRKE 840 FMIIRQKIVK IQAHVRGHQV RKSYRRIVWS VGIVEKIILR WRRKRRGLRG FQPVKQLEGP 900 SPIQQLEGPS QIQTAKEEEE DEYDYLKDGR KQAEGRLQRA LARVKSMTQY PEAREQYSRI 960 ANRVTELQEP QAMMIQDDMQ SDGAIADGGD FMAELEELCG DGDAPMPTIL

Sequence ? help Back to Top

Protein Sequence Length: 1010 aa Download sequence

MAEVRKYGLP NQPPDIPQIL LEAQNRWLRP TEICHILSNY KKFSIAPEPP NRPASGSLFL  60
FDRKILRYFR KDGHNWRKKK DGKTVKEAHE KLKVGSVDVL HCYYAHGEEN ENFQRRTYWL  120
LEEGFMNIVL VHYLEVKGGK QSFSRSKEAE ESAGLSNADS PACSNSFAKK FGATDNCRAS  180
SRYHPFVEMQ QPVDGVMMNN MLGVSAPRYH GEMQTTTANS DNHFATHYDI AGVFNEAGAG  240
LRGVSKTLHD SVRFAEPYPE YSAEFMKPAL YSSNATMESN NLDDNSRLET FMSEALYTNN  300
LTQKEADALS AAGIMSSQAE NNSYTDGIRY PLLKQSSLDL FKIEPDGLKK FDSFSRWMSS  360
ELPEVADLDI KSSSDAFWSS TETVNVADGT SIPINEQLDA FAVSPSLSQD QLFSIIDVSP  420
SYACTGSRNK VLITGTFLAN KEHVENCKWS CMFGDVEVPA EVLAHGSLRC YTPVHLSGRV  480
PFYVTCSNRV ACSEVREFEF RDSDARQMDT SDPQTTGINE MHLHIRLEKL LSLGPDDYEK  540
YVMSDGKEKS EIINTISSLM LDDKCLNQAV PLDEKEVSTA RDQNIEKLVK EKLYCWLVHK  600
VHDEDKGPNV LGKEGQGVIH LVAALGYDWA VRPIITAGVK VNFRDARGWT ALHWAASCGR  660
ERTVGALIAN GAESGLLTDP TPQFPAGRTA ADLASENGHK GIAGFLAESA LTSHLSALTL  720
KESKDGNVKE ICGLGGAEDF AESSSSQLAY RDSQAESLKD SLSAVRKSTQ AAARIFQAFR  780
VESFHRKKVV EYGDDDCGLS DEHTLSLVSI KNAKPGQNDG AHSAAVRIQN KFRGWKGRKE  840
FMIIRQKIVK IQAHVRGHQV RKSYRRIVWS VGIVEKIILR WRRKRRGLRG FQPVKQLEGP  900
SPIQQLEGPS QIQTAKEEEE DEYDYLKDGR KQAEGRLQRA LARVKSMTQY PEAREQYSRI  960
ANRVTELQEP QAMMIQDDMQ SDGAIADGGD FMAELEELCG DGDAPMPTIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G22660.5