PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G26170.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 216aa    MW: 23654.5 Da    PI: 6.7903
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G26170.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.3e-1970120256
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       y+G+r+++ +g+W+AeIrdp +    +r++lg+f tae Aa+a+++a+++++g+
  OGLUM07G26170.1  70 LYRGIRRRP-WGKWAAEIRDPAK---GARVWLGTFATAEAAARAYDRAARRIRGA 120
                      69*******.**********843...4*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MCGGAIISDF IPQREAHRAA TGSKRALCAS DFWPSASQEA ADFDHLTAPC TFTPDQAAEE  60
PTKKRERKTL YRGIRRRPWG KWAAEIRDPA KGARVWLGTF ATAEAAARAY DRAARRIRGA  120
KAKVNFPNED PPLDDPAADG HSHGGAAIPC REFMDYDAVM AGFFHQPYVV ADGVPAVPAE  180
EAPTVAYVHH HLPPQPQQDA GLELWSFDNI HTAVPM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16378KKRERKTLYRGIRRRP
26479KKRERKTLYRGIRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.16e-28ERF family protein