PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G26640.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 346aa MW: 37561.5 Da PI: 7.3901

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G26640.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.1	1.4e-52	12	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtdeel+ +yL+ ++++ ++++ +i++vdiyk++PwdLp+k+ +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk++++ OGLUM07G26640.1 12 LPPGFRFHPTDEELILHYLRSRATAGQCPV-PIIADVDIYKFDPWDLPSKAVYGESEWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIHD 104 79**************************.88***********77667899*********************************9 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +ge vg+kk Lvfy+gr pkg+kt+W+mheyrl OGLUM07G26640.1 105 SaTGESVGVKKALVFYRGRPPKGTKTSWIMHEYRL 139 988999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MEMTMSSAAT SLPPGFRFHP TDEELILHYL RSRATAGQCP VPIIADVDIY KFDPWDLPSK 60 AVYGESEWYF FSPRDRKYPN GIRPNRAAGS GYWKATGTDK PIHDSATGES VGVKKALVFY 120 RGRPPKGTKT SWIMHEYRLA ADPLAAAANT YKPSSSSRFR NVSMRLDDWV LCRIYKKSGQ 180 ASPMMPPLAA DYDHDEPSGV LDDAYSFYAP PMISTTLIPK LPKIPSISEL FDEHALAQIF 240 DAAADPPADH HQHALAVHPS LNQLLGVGDN FLAECYPSTA STATVAGGKR KASPAGDYAG 300 GGHTPVKRLN GSCFDVAPQS VVGGLQATPS SVLAGLNHQM LPPQLF

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MEMTMSSAAT SLPPGFRFHP TDEELILHYL RSRATAGQCP VPIIADVDIY KFDPWDLPSK  60
AVYGESEWYF FSPRDRKYPN GIRPNRAAGS GYWKATGTDK PIHDSATGES VGVKKALVFY  120
RGRPPKGTKT SWIMHEYRLA ADPLAAAANT YKPSSSSRFR NVSMRLDDWV LCRIYKKSGQ  180
ASPMMPPLAA DYDHDEPSGV LDDAYSFYAP PMISTTLIPK LPKIPSISEL FDEHALAQIF  240
DAAADPPADH HQHALAVHPS LNQLLGVGDN FLAECYPSTA STATVAGGKR KASPAGDYAG  300
GGHTPVKRLN GSCFDVAPQS VVGGLQATPS SVLAGLNHQM LPPQLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	5e-83	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G26640.1