PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM08G00350.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 303aa    MW: 33758.6 Da    PI: 6.6475
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM08G00350.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.72.8e-50141441125
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvka....eekewyfFskrdkkyatgkrknratksgyWkat 86 
                      +ppGfrFhPt+eelv +yL++kv+++k++l ++i+e+d+y++ePwdL++       +    e++ewyfFs +d+ky++g+r+nrat++g+Wkat
  OGLUM08G00350.1  14 VPPGFRFHPTEEELVGYYLARKVASQKIDL-DIIQELDLYRIEPWDLQErckyG--GhggdEQTEWYFFSYKDRKYPSGTRTNRATAAGFWKAT 104
                      69****************************.99**************9535441..14443666****************************** PP

              NAM  87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmhe 125
                      g+dk+vls+ +++++g++ktLvfykgrap+g+ktdW++he
  OGLUM08G00350.1 105 GRDKPVLSSpSTRVIGMRKTLVFYKGRAPNGRKTDWIIHE 144
                      *******9988899*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MDRHEEEAGE SPCVPPGFRF HPTEEELVGY YLARKVASQK IDLDIIQELD LYRIEPWDLQ  60
ERCKYGGHGG DEQTEWYFFS YKDRKYPSGT RTNRATAAGF WKATGRDKPV LSSPSTRVIG  120
MRKTLVFYKG RAPNGRKTDW IIHERKKPMP NQQQHRLSYG CIPGSYGAGA YAAVPDNYSL  180
LLHHDNPSFA GRPLMGAAAS ALFANNNNNS VVDHSNILSS ESKLHFSDMM PPLESPTIVD  240
GEGYVSQASS CVDVDQQAGI VDWNLLTSLL PPPAHQLFHH LPSASSSKNS NNISSSGFID  300
DRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.12e-71NAC family protein