PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM08G03750.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 167aa MW: 18216.2 Da PI: 5.8134

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM08G03750.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.6	4.3e-31	1	52	4	55
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +rWt++LH+rFv+ave LGG+++AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ OGLUM08G03750.1 1 MRWTSTLHARFVHAVELLGGHDRATPKSVLELMDVKDLTLAHVKSHLQMYRT 52 79*************************************************7 PP
2	Myb_DNA-binding	46.7	7.4e-15	1	51	2	48
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 +rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ OGLUM08G03750.1 1 MRWTSTLHARFVHAVELLGGHdraTPKSVLELMDvKDLTLAHVKSHLQMYR 51 59***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MRWTSTLHAR FVHAVELLGG HDRATPKSVL ELMDVKDLTL AHVKSHLQMY RTVKNTERPA 60 ASSDQADGFE NGSAGEICDE NSLDLHGGCR PEAMSAAATA AAAARHGRED WSGFHESNTG 120 TMQTLKDMQS KSLEILSDMN SCVSETTSST SELNLEFTLG RPQNRPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-40	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM08G03750.1