PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM08G04690.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 184aa    MW: 20282.4 Da    PI: 4.8349
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM08G04690.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.99.3e-173887255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      y GVr+++ +gr++AeIr p++   + r++lg+f+taeeAa a++  + ++ g
  OGLUM08G04690.1 38 EYLGVRRRP-WGRYAAEIRNPYT---KERHWLGTFDTAEEAAVAYDLSAISISG 87
                     588******.**********865...5*******************99988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MADAVEQHHQ QEEIAAAMTT PTPQQMMMRR RRARASSEYL GVRRRPWGRY AAEIRNPYTK  60
ERHWLGTFDT AEEAAVAYDL SAISISGAAA ARTNFLYPDM HHHHPSPPQH ALSPAVPPPP  120
PPPPPSPLYD DDNADDDYQL QAAAAAAAEE VEAGDDESLT IATILQSFQY QQSVPPASSG  180
SMFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.11e-25ERF family protein