PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM08G10220.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

TALE

Protein Properties

Length: 314aa MW: 34180.1 Da PI: 5.5677

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM08G10220.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24	6.7e-08	256	289	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + OGLUM08G10220.1 256 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 289 569*****************************87 PP
2	ELK	26.8	1.2e-09	210	231	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++L+++++E++ OGLUM08G10220.1 210 ELKHELKQGYKEKLIDIREEIL 231 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MAFHDHLPHE MTMQALGADD AATTSDSSAS PSGAAAAAAA AAAAAAAAGA EILAHPLYEQ 60 LLSAHVACLR IATPVDQLPR IDAQLAQSQG VVAKYSALAA AAAGDDGREL DQFMTHYVLL 120 LCSFKEQLQQ HVRVHAMEAV MACWELEQNL QSLTGASPGE GTGATMSDGE DDQADSEANM 180 YDPSLDGADN MGFGLPTESE RSLMERVRQE LKHELKQGYK EKLIDIREEI LRKRRAGKLP 240 GDTTSTLKAW WQSHAKWPYP TEEDKARLVQ ETGLQLKQIN NWFINQRKRN WHSNPSSSTS 300 VKTKRKSNAG DNNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-156	TALE family protein

Link Out ? help Back to Top
Ensembl	OGLUM08G10220.1