PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM08G11590.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 447aa MW: 49812.9 Da PI: 4.6139

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM08G11590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	61.3	3.1e-19	9	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdke 91 l+pGf+F+P+de+lv+++L + +++ +++l + + d +v Pw+L ++ +++e++ yf +++d + r+ r+ + +g+W ++ +++ OGLUM08G11590.1 9 LTPGFKFEPSDEQLVQFFLLPYLRELPVPLGGLVIRDDPRSVPPWKLFaRNGRGDEEDAYFLAPADGEG----RQARTCDggRGRWITQRLERT 98 579*************************8888888******8334445666779988887753....5555433238999999998 PP NAM 92 vlsk.......kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++v k+ L ++ g+ + g +t Wvmhey++ OGLUM08G11590.1 99 GNLRlaggggsGEAVVFEKHRLNYHAGEGRCG-STGWVMHEYAV 141 8887889888777789*******9999997.9******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MAAAKMAGLT PGFKFEPSDE QLVQFFLLPY LRELPVPLGG LVIRDDPRSV PPWKLFARNG 60 RGDEEDAYFL APADGEGRQA RTCDGGRGRW ITQRLERTGN LRLAGGGGSG EAVVFEKHRL 120 NYHAGEGRCG STGWVMHEYA VVKPAALGAR HRACHIAFTG HGQKRKRVPD GYVDVEDDGS 180 KARTNAAAAV PPSSTAAMSA CPSNVTYNQG CHISPEQSIE QHFPAEHNNI QIQQQAYYQS 240 QDHEQCQYSD EEKYLLQQIK QEQYYYNQQN CFLPGQGNQE LYYNDEQQQI FSLPEHQCSQ 300 EQYCHHDDQQ DCVLPEQHSQ ELHGYNNEEQ GYLLPPEPID QEEQALFVGG EPQHEQQPMT 360 STPRQALLDY DDGKLLPPVG VNGAIAIPPQ DAAVASNDDD GGQATEAPAA KMTAEEKKWF 420 MEELLTEGCW SGPLLFDQPY YGSALKN

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MAAAKMAGLT PGFKFEPSDE QLVQFFLLPY LRELPVPLGG LVIRDDPRSV PPWKLFARNG  60
RGDEEDAYFL APADGEGRQA RTCDGGRGRW ITQRLERTGN LRLAGGGGSG EAVVFEKHRL  120
NYHAGEGRCG STGWVMHEYA VVKPAALGAR HRACHIAFTG HGQKRKRVPD GYVDVEDDGS  180
KARTNAAAAV PPSSTAAMSA CPSNVTYNQG CHISPEQSIE QHFPAEHNNI QIQQQAYYQS  240
QDHEQCQYSD EEKYLLQQIK QEQYYYNQQN CFLPGQGNQE LYYNDEQQQI FSLPEHQCSQ  300
EQYCHHDDQQ DCVLPEQHSQ ELHGYNNEEQ GYLLPPEPID QEEQALFVGG EPQHEQQPMT  360
STPRQALLDY DDGKLLPPVG VNGAIAIPPQ DAAVASNDDD GGQATEAPAA KMTAEEKKWF  420
MEELLTEGCW SGPLLFDQPY YGSALKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	4e-10	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM08G11590.1