PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM08G12590.2

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 431aa MW: 46952.4 Da PI: 10.2033

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM08G12590.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	40.9	4.6e-13	34	61	1	28
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAt 28 kprlrWt +LH+rFv+av+qLGG++ A OGLUM08G12590.2 34 KPRLRWTADLHDRFVDAVAQLGGPDTAR 61 79***********************996 PP
2	Myb_DNA-binding	27.2	8.8e-09	36	57	1	22
TSSS-HHHHHHHHHHHHHTTTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg 22 r+rWT+++++++vdav+qlGg+ OGLUM08G12590.2 36 RLRWTADLHDRFVDAVAQLGGP 57 89******************98 PP
3	Myb_DNA-binding	31.4	4.5e-10	241	272	22	48
T....-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 22 g....tWktIartmg.kgRtlkqcksrwqkyl 48 + t+ktI+rtmg kg+tl ++ks++qky+ OGLUM08G12590.2 241 RknesTPKTIMRTMGvKGLTLFHLKSHLQKYR 272 366779*************************7 PP
4	G2-like	47.2	4.8e-15	243	273	25	55
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++ tPkti+++m+vkgLtl h+kSHLQkYRl OGLUM08G12590.2 243 NESTPKTIMRTMGVKGLTLFHLKSHLQKYRL 273 578***************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MFPGLIHHHR LLDADVGGGG GGSSAGLVLT ADPKPRLRWT ADLHDRFVDA VAQLGGPDTA 60 RGRSMSDKLL RSSAEEVCAP AEMAEQGSSS AWGGSHSKQV VFAAESAAEQ ALAAPRALDA 120 FTRPFRRAAV SAGWRFTIVG TRKYAFPRDL TRTSSLVMMC VILVAGRNRA TCSSCSFGTV 180 RMTSSPRFTS DRSSRCRSRP PPEPAVRTPA AAAAPRLLRC FKDARRACFL AVSKKNEQGE 240 RKNESTPKTI MRTMGVKGLT LFHLKSHLQK YRLGKQSGKE MAEQSKDASY ILGAQSGTNL 300 SPTVPTPDLK ESQELKEALR AQMEVQRKLH EQVEVQRHVQ IRMEAYQNYI DTLLEKACNI 360 VSEQLNGFSI SDHDLTSAGV MLSSSDTLSP SIFHQLSVSS ISLHSPGGKS SPFAADADLF 420 FQKAPEKRKS Y

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MFPGLIHHHR LLDADVGGGG GGSSAGLVLT ADPKPRLRWT ADLHDRFVDA VAQLGGPDTA  60
RGRSMSDKLL RSSAEEVCAP AEMAEQGSSS AWGGSHSKQV VFAAESAAEQ ALAAPRALDA  120
FTRPFRRAAV SAGWRFTIVG TRKYAFPRDL TRTSSLVMMC VILVAGRNRA TCSSCSFGTV  180
RMTSSPRFTS DRSSRCRSRP PPEPAVRTPA AAAAPRLLRC FKDARRACFL AVSKKNEQGE  240
RKNESTPKTI MRTMGVKGLT LFHLKSHLQK YRLGKQSGKE MAEQSKDASY ILGAQSGTNL  300
SPTVPTPDLK ESQELKEALR AQMEVQRKLH EQVEVQRHVQ IRMEAYQNYI DTLLEKACNI  360
VSEQLNGFSI SDHDLTSAGV MLSSSDTLSP SIFHQLSVSS ISLHSPGGKS SPFAADADLF  420
FQKAPEKRKS Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	7e-41	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM08G12590.2