PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM08G12590.4

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 246aa MW: 26888.5 Da PI: 8.4777

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM08G12590.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.5	1.5e-33	34	88	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LH+rFv+av+qLGG++kAtPkti+++m+vkgLtl h+kSHLQkYRl OGLUM08G12590.4 34 KPRLRWTADLHDRFVDAVAQLGGPDKATPKTIMRTMGVKGLTLFHLKSHLQKYRL 88 79****************************************************8 PP
2	Myb_DNA-binding	69.8	4.5e-22	36	87	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav+qlGg+ t+ktI+rtmg kg+tl ++ks++qky+ OGLUM08G12590.4 36 RLRWTADLHDRFVDAVAQLGGPdkaTPKTIMRTMGvKGLTLFHLKSHLQKYR 87 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MFPGLIHHHR LLDADVGGGG GGSSAGLVLT ADPKPRLRWT ADLHDRFVDA VAQLGGPDKA 60 TPKTIMRTMG VKGLTLFHLK SHLQKYRLGK QSGKEMAEQS KDASYILGAQ SGTNLSPTVP 120 TPDLKESQEL KEALRAQMEV QRKLHEQVEV QRHVQIRMEA YQNYIDTLLE KACNIVSEQL 180 NGFSISDHDL TSAGVMLSSS DTLSPSIFHQ LSVSSISLHS PGGKSSPFAA DADLFFQKAP 240 EKRKSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	6e-67	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM08G12590.4