PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM08G12590.5

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 185aa MW: 19186.5 Da PI: 10.5312

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM08G12590.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	42.3	1.6e-13	34	60	1	27
G2-like 1 kprlrWtpeLHerFveaveqLGGsekA 27 kprlrWt +LH+rFv+av+qLGG++ A OGLUM08G12590.5 34 KPRLRWTADLHDRFVDAVAQLGGPDTA 60 79***********************98 PP
2	Myb_DNA-binding	29	2.5e-09	36	57	1	22
TSSS-HHHHHHHHHHHHHTTTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg 22 r+rWT+++++++vdav+qlGg+ OGLUM08G12590.5 36 RLRWTADLHDRFVDAVAQLGGP 57 89******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MFPGLIHHHR LLDADVGGGG GGSSAGLVLT ADPKPRLRWT ADLHDRFVDA VAQLGGPDTA 60 QQTNKNKSCR MKNLAGSIFF PLFLFGWERK AKEGSGGSGW RDGGRGGFKY GACGGGESGI 120 CGGAQGRLPP AAAAAASRKD QSFSTTSATA TPSRSAATGP AQQEGGERAR PWMGERVVFS 180 GKVER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	6e-13	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM08G12590.5