PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM08G12590.6
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family G2-like
Protein Properties Length: 82aa    MW: 8782.01 Da    PI: 10.9225
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM08G12590.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like42.81.2e-133459126
          G2-like  1 kprlrWtpeLHerFveaveqLGGsek 26
                     kprlrWt +LH+rFv+av+qLGG++ 
  OGLUM08G12590.6 34 KPRLRWTADLHDRFVDAVAQLGGPDS 59
                     79*********************974 PP
2Myb_DNA-binding316e-103657122
                     TSSS-HHHHHHHHHHHHHTTTT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg 22
                     r+rWT+++++++vdav+qlGg+
  OGLUM08G12590.6 36 RLRWTADLHDRFVDAVAQLGGP 57
                     89******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
MFPGLIHHHR LLDADVGGGG GGSSAGLVLT ADPKPRLRWT ADLHDRFVDA VAQLGGPDSH  60
RRQPPKVKKQ KFAQGSLLLS SH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.25e-14G2-like family protein