PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM08G12880.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 180aa MW: 20094.5 Da PI: 9.0857

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM08G12880.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	55.1	1.6e-17	36	96	3	63
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +lkr rrk++NRe+A+rsR+RK++ ++ L+ v +L+ eNk+L +l++ ++ +a +s++ OGLUM08G12880.1 36 DLKRKRRKESNRESAKRSRLRKQQHLDDLTSQVNQLKMENKQLTTTLNMVTQSCAFAESQN 96 79****************************************************9777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MTLSGGILSS GITSGSSHGT RSSGSEGDIQ LQVQMDLKRK RRKESNRESA KRSRLRKQQH 60 LDDLTSQVNQ LKMENKQLTT TLNMVTQSCA FAESQNSVLR TQMMELDSRL SALREIIFYM 120 NNGNQSPSNP TIAATTYPST TTMTAATTGH YDYYDAFTAN AWGSGMQMIQ QPIDQFLYQC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	38	43	KRKRRK
2	39	44	RKRRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	9e-15	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM08G12880.1