PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM08G16680.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ZF-HD
Protein Properties Length: 189aa    MW: 20116.6 Da    PI: 7.5534
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM08G16680.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer94.87e-3096151258
      ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                       +vrY eC++NhAa++GghavDGC+Ef+++ geegt  al+CaACgCHR+FHRr v+
  OGLUM08G16680.1  96 GRVRYGECRRNHAARMGGHAVDGCREFLAE-GEEGTGGALRCAACGCHRSFHRRVVV 151
                      589**************************8.999********************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MGFNFVDWWA FGYGLGGLVA LSGEQREQEY VARATRGHSD ALQRDRQITE CDESGRSGSI  60
NAMMKRMVIL RRCEPPPLPP PQPAAAVVAA MGGCCGRVRY GECRRNHAAR MGGHAVDGCR  120
EFLAEGEEGT GGALRCAACG CHRSFHRRVV VVQQCCACDT AAAAAAAGGW EWRDCSPESS  180
SSASSTTAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.12e-18ZF-HD family protein