PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM08G17690.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 243aa    MW: 25923.6 Da    PI: 4.4642
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM08G17690.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544.1e-172675255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +ykGVr +k +grWv+eIr p++   r r++lg++ +ae+Aa+a +aa+ +l+g
  OGLUM08G17690.1 26 RYKGVRLRK-WGRWVSEIRMPNS---RERIWLGSYESAEKAARAFDAAAVCLRG 75
                     7******99.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MDHIGISGGG EGGVVSPAQP SSPERRYKGV RLRKWGRWVS EIRMPNSRER IWLGSYESAE  60
KAARAFDAAA VCLRGSRGAG SLNFPESPPP DVRRRFPGAA LTVEQIQAEA ARHANRPFPA  120
NTAAAGGSSS SYSISQRQEA AAPARSTSND DTAMSSVPST DGGAADYDGG DDVIDWSFMD  180
TLPAMSSSAA STNADLVPAM DDFMYGFLHT MPPSPCEDGG EDVMIDGNCN MDQTFFSVDL  240
WIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-25ERF family protein