PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM08G21360.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 335aa    MW: 36602.4 Da    PI: 7.2318
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM08G21360.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.41.2e-52241541128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                      lppGfrFhPtdeelv++yL++kv +  +    v i+evd++++ePw+Lp++++ +ekewyfFs rd+ky+tg r+nrat +gyWkatgkd+ev+
  OGLUM08G21360.1  24 LPPGFRFHPTDEELVTFYLAAKVFNGACCG-GVdIAEVDLNRCEPWELPEAARMGEKEWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVV 116
                      79*************************888.455***************9888999************************************** PP

              NAM  94 sk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++   +g+l+g+kktLvfykgrap+gekt+Wv+heyrl
  OGLUM08G21360.1 117 AAaaaGGALIGMKKTLVFYKGRAPRGEKTKWVLHEYRL 154
                      998888999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MGDALWEMLG EEMAAAAAAG EHGLPPGFRF HPTDEELVTF YLAAKVFNGA CCGGVDIAEV  60
DLNRCEPWEL PEAARMGEKE WYFFSLRDRK YPTGLRTNRA TGAGYWKATG KDREVVAAAA  120
AGGALIGMKK TLVFYKGRAP RGEKTKWVLH EYRLDGDFAA ARRSTKEEWV ICRIFHKVGD  180
QYSKLMMMKS PASYYLPVSH HHPSSIFHDL PPVPFPNPSL VPFHHDLPTS FHPPLLQHSH  240
ANSKNSSSNN GGFVFPNEPN TTNSSDNHIS CNGAMAAAFP SFSCASTVTG KGGPPAQLGV  300
NAGQQEPPPP TWMDAYLQHS GFIYEMGPPA VPRGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76420.14e-82NAC family protein