PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM08G22130.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 189aa    MW: 20296.3 Da    PI: 9.1806
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM08G22130.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.88.3e-161365255
              AP2  2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55
                     g +GVr++  +grW+AeIr+p  +g +  +r ++g+f ++  Aa a++aa  +++g
  OGLUM08G22130.1 13 GLRGVRRRL-WGRWAAEIRVP--RGhRAaARLWIGTFPSPAAAALAYDAALYCFHG 65
                     579***877.**********9..455447************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MVPPAAHAPK NLGLRGVRRR LWGRWAAEIR VPRGHRAAAR LWIGTFPSPA AAALAYDAAL  60
YCFHGGAPPG NRAFNFPHAP RLRIDDRRRH ALTPGHVRAI AERYAHDVGS VLFRPLPPPP  120
PPVAAAAVPV FAAPAPPMAP APANHAADPY YCNEPDTTTD EDVMAAADRL LSMDIEEVAA  180
LIAIVQQGE