PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM08G23090.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 230aa    MW: 24512 Da    PI: 10.2589
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM08G23090.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.67.8e-30191551128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk.atgkdkev 92 
                      lppGfrFhPtdeelvv+yL++k+ g +l++  vi+++ +++k++Pwd+p +  +++ + yfF+ r  ++ +g+r++ +++ g Wk a g+dk+v
  OGLUM08G23090.1  19 LPPGFRFHPTDEELVVQYLRRKAFGLPLPA-AVIPDLhNLFKLDPWDIPGA--SSDGDKYFFAVRPPAA-RGRRQQVTASGGCWKpAGGRDKPV 108
                      79****************************.8899998***********43..456789*****99875.68899999999****66678***9 PP

              NAM  93 lsk...kgelvglkktLvfy........kgrapkgektdWvmheyrl 128
                      +++   +++lvg+kk +vf          + a  +    W+mhey+l
  OGLUM08G23090.1 109 VVArcgGSHLVGVKKGMVFVprqgrkapAAAAAAAGGGCWIMHEYSL 155
                      9988988999**********8854433222333333667******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MERAAAAAPV VVRHGGVVLP PGFRFHPTDE ELVVQYLRRK AFGLPLPAAV IPDLHNLFKL  60
DPWDIPGASS DGDKYFFAVR PPAARGRRQQ VTASGGCWKP AGGRDKPVVV ARCGGSHLVG  120
VKKGMVFVPR QGRKAPAAAA AAAGGGCWIM HEYSLALPMH KKGCLAEAEE WVVCRIFQRS  180
SSGSRSPRRP DNDVRRTMPA VAELGRSPSS SSSQSSCVTS SSDQEEVSSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.15e-31NAC family protein