PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G03800.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family B3
Protein Properties Length: 1523aa    MW: 173751 Da    PI: 9.3492
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G03800.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.91.3e-111081841698
                      EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
               B3  16 lvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       ++ k fa++  g     s   +le ++g++++v++  +k  ++ v+++GW+ F+ a +L++gD++ F ++g+s f  +v++f+
  OGLUM09G03800.1 108 KTILKMFAKNVqG-L--ISGVAKLEVPDGKTYDVEI--SKEHNELVFRSGWEVFAIAYELEQGDILDFGYSGNSHF--KVQIFN 184
                      4788999977744.4..35579**************..**********************************9999..999986 PP
2B354.81.7e-17229320199
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                      ffkv+++ +  k   l +pkkfa++  gk   + +++le ++g+ ++v++  +  +++ vl++GW +F +  +Lk gD +vF ++g+s f  +v
  OGLUM09G03800.1 229 FFKVMMSVSDVKDE-LAIPKKFAANVRGK--IPEQVRLEVSDGKMYNVQV--TEEQDELVLRSGWANFSSTYQLKHGDLLVFIHSGHSHF--KV 315
                      89***999999987.********888666..3446***************..********************************999999..99 PP

                      EEE-S CS
               B3  95 kvfrk 99 
                       +f+ 
  OGLUM09G03800.1 316 LIFDP 320
                      99885 PP
3B336.31e-11444526992
                      HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
               B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       + +sg lv+ k++a ++ ++  +++t++l ++ g ++W++ l  +   +  y l++GW +F + n L+egD++vF+ +++ ++  l
  OGLUM09G03800.1 444 TSVASGSLVFCKDYAVRYLLD--QNRTIKLCQSGGsKTWDISL--DMDTDDlYALSTGWLDFFRGNLLQEGDICVFEASKSkRGVAL 526
                      4556778***********888..4558888887777*******..8888888*************************8876444444 PP
4B339.21.2e-12588686199
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                      f++v+ +s+ ++++ l+++ k+a+++   k +   ++l+  e+  + +  l ++ + + + l kGW +Fv++n+L+  D+++F+l+++ ++ + 
  OGLUM09G03800.1 588 FLSVMRSSNCTRQSSLCFSVKYASKYLPHKDQ--NMRLRLpETKYKCKAALHIDTSTNLHKLLKGWGKFVNDNKLEIHDICLFQLMKNkKKLTV 679
                      7889999999999*************544345..5666663455778888877999999***************************99999999 PP

                      EEEEE-S CS
               B3  93 vvkvfrk 99 
                      +v+++rk
  OGLUM09G03800.1 680 TVHIIRK 686
                      9999987 PP
5B360.43.1e-19715802197
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                      f+kv+     +k+g +++p kfa+++gg+   s t++le+++g+++ev++   k  +  vl++GW++F++a +L+ gD++vF ++g+s f  +v
  OGLUM09G03800.1 715 FIKVM--ITDFKNG-VTIPAKFARNFGGQM--SGTVKLETRNGKTYEVQV--AKELNNLVLRSGWERFASAYELEKGDILVFIYSGNSHF--KV 799
                      67777..6678887.********9999994..559***************..**********************************9999..66 PP

                      EEE CS
               B3  95 kvf 97 
                       ++
  OGLUM09G03800.1 800 WIY 802
                      655 PP
6B340.54.8e-139311012893
                       -HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
               B3    8 sdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93  
                       + + + g+l ++k++a ++ ++k+e  t++l +  ++ +W++ l  +   +  y l++GW +F + n+L+egD++vF+ ++++++  v
  OGLUM09G03800.1  931 KASATDGLLAISKDYAVSYLLDKNE--TIKLCHsGRSMTWDISL--DIDTDDqYALSTGWLDFIRNNHLQEGDICVFEASKNKRG--V 1012
                       556677999**********888767..56665536678899999..4444434*************************8887666..3 PP
7B334.92.7e-11108911691396
                       TT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
               B3   13 sgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96  
                       s+ ++++ k+a+++     e++ +++   + ++s++ k  ++ + + + l++GW +Fv++n++k gD+++F+l+++ ++  l+++v
  OGLUM09G03800.1 1089 SRYMCFSAKYAAKYlP--REKN-KIMRLRLPNKSYRYKAVFKINNKVHKLGGGWGKFVDDNKIKLGDICLFQLMKNkKK--LMMMV 1169
                       5667888899999942..3344.455555566777777777999999**************************997444..44444 PP
8B344.52.9e-14120712831494
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
               B3   14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94  
                       + +++p k ae ++g+ ++     l+++sg++W+v +   k  ++ +l++GW++F+ka++L+e+D + F+ +g+ ++++ +
  OGLUM09G03800.1 1207 HGISIPEKVAEIFSGQITK--GFNLKSPSGETWRVGV--AKVADELILKSGWEDFAKAHELQENDLLFFTCNGHGNGSCSF 1283
                       459*******777777555..59999***********..*******************************77665554443 PP
9B343.36.6e-1414161511196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
               B3    1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89  
                       f+ vl +++v ++++l++p +fa++h +   +s ++ l    + ++W+vk+ y +++ +++     W +F ++n+L+eg +++F+l++  ++
  OGLUM09G03800.1 1416 FVVVLQTAHVRRRNILIVPTRFAADHLER--KSHDILLIRpNRKQKWSVKYYYlSNTTRGFNCH-RWIKFIRENRLREGNVCIFELMKGaRR 1504
                       788999********************544..45567776636779******8865555555544.8*******************9975455 PP

                       E..EEEE CS
               B3   90 felvvkv 96  
                         ++v+v
  OGLUM09G03800.1 1505 PIMTVHV 1511
                       5556655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1523 aa     Download sequence    
MMNNTPCGHE GSMSYHDNHL QSPSESSSLF NISLPPHSPF QELSGVDSTS LLVSDPPNMQ  60
QFCLRCSWTN PKRLAKPSLA IASLSHQHLA FDKTRCMFIL KIENDTLKTI LKMFAKNVQG  120
LISGVAKLEV PDGKTYDVEI SKEHNELVFR SGWEVFAIAY ELEQGDILDF GYSGNSHFKV  180
QIFNPRASLM ITIDNHPEGK VWMNKPSTTC MDCITNHYWL HMDDRERYFF KVMMSVSDVK  240
DELAIPKKFA ANVRGKIPEQ VRLEVSDGKM YNVQVTEEQD ELVLRSGWAN FSSTYQLKHG  300
DLLVFIHSGH SHFKVLIFDP SCTEKEFSCV VTDNTSHVHE RSISHDNHLQ SPRSEILGKN  360
YSLCSSRKRS RMNPADYPSQ RPDVPSSEDI KDPMSSGGLQ KSKKSCYVLP MLYNMTSAQE  420
AEVLALEKKI QPQIPLYITA MDKTSVASGS LVFCKDYAVR YLLDQNRTIK LCQSGGSKTW  480
DISLDMDTDD LYALSTGWLD FFRGNLLQEG DICVFEASKS KRGVALTFHP FKESHCPKSS  540
EYTLSTKSPT RRVPKRDYFA TNLTNLTDQL ERKVKNKIKF IQSDIPIFLS VMRSSNCTRQ  600
SSLCFSVKYA SKYLPHKDQN MRLRLPETKY KCKAALHIDT STNLHKLLKG WGKFVNDNKL  660
EIHDICLFQL MKNKKKLTVT VHIIRKGEME KSHRVCKNCV ANHYWLHMDN HGKSFIKVMI  720
TDFKNGVTIP AKFARNFGGQ MSGTVKLETR NGKTYEVQVA KELNNLVLRS GWERFASAYE  780
LEKGDILVFI YSGNSHFKVW IYDPSACEKE LPCIITEQLP RVQQRSISHN NHTQLKRNAK  840
SAKLYVDSSG HSKETSEINP ANSPSWKPTE RVPSSEELDE PVDLANVQKA TKSFYSLPRM  900
CNMTSAQKAE VDALEKRIKP QIPLYITVMD KASATDGLLA ISKDYAVSYL LDKNETIKLC  960
HSGRSMTWDI SLDIDTDDQY ALSTGWLDFI RNNHLQEGDI CVFEASKNKR GVALIFHPLK  1020
QSHHPKPPGC VPSTKFPRHG VSKPNYIVSR FTTLSGQLKI KVEAKVQAMQ SEIPIFVAVM  1080
RESFIRGRSR YMCFSAKYAA KYLPREKNKI MRLRLPNKSY RYKAVFKINN KVHKLGGGWG  1140
KFVDDNKIKL GDICLFQLMK NKKKLMMMVM GEKGCESCRK WQEHYYREHM DVSRIRFFRL  1200
MTGDFAHGIS IPEKVAEIFS GQITKGFNLK SPSGETWRVG VAKVADELIL KSGWEDFAKA  1260
HELQENDLLF FTCNGHGNGS CSFDVLIFDA SGCEKVSCFF TGKKNSYMCK NFNSIGGQVA  1320
GQYLSSDSED TSTPSVLIGS PHKASTSKKL SGKTKTNPRK EPEDPNCSHW HVIEEKNTDD  1380
DEHADYHYTR FANYLTGEER DEIFSLVSLQ PGNPVFVVVL QTAHVRRRNI LIVPTRFAAD  1440
HLERKSHDIL LIRPNRKQKW SVKYYYLSNT TRGFNCHRWI KFIRENRLRE GNVCIFELMK  1500
GARRPIMTVH VIGKADNRFV LLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-28B3 family protein