PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G05050.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 221aa    MW: 23535.6 Da    PI: 8.8667
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G05050.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.73.8e-22171528125
              NAM   8 hPtdeelvveyLkkkvegkklelee.........vikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratk..sgyWka 85 
                      hPt++el++ yL++++   +++ ++         +i+++d y ++P +L +     +++ +++ wyfFs+ ++++++g+r+ ra++  +g W++
  OGLUM09G05050.1  17 HPTEQELISSYLHPRLLLATTKPASagaaggvpsFIHHADAYAADPAELTArhlpaRAADGTRAWYFFSPVRTTTERGTRRARAVEsgDGCWHS 110
                      9**************88777433334667787768**************84466666666888********************87744788*** PP

              NAM  86 tgkdkevlskkgelvglkktLvfykgrapkge..ktdWvmhe 125
                          ++v+++ g+ vg ++ + f k+r+++g+  +t W+m e
  OGLUM09G05050.1 111 ESAVRAVVDAAGRRVGHRQFFSFVKKREEDGKrvRTGWLMVE 152
                      ************************99999887558*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MADADADACP AVFASRHPTE QELISSYLHP RLLLATTKPA SAGAAGGVPS FIHHADAYAA  60
DPAELTARHL PARAADGTRA WYFFSPVRTT TERGTRRARA VESGDGCWHS ESAVRAVVDA  120
AGRRVGHRQF FSFVKKREED GKRVRTGWLM VELGVDNDAA SASSSNELVL CKIYMTPRMP  180
PPSPPSAVTS SAATMELMPR VPPPSPPSAV TPARSTLAGT T