PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM09G05500.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 153aa MW: 17165.2 Da PI: 9.0017

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM09G05500.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.2	9.6e-15	29	82	3	56
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 e kr rrk++NRe+ArrsR RK++ ++eL+ v +L+++N++L l+ +++ OGLUM09G05500.1 29 EKKRKRRKESNRESARRSRMRKQQHLDELTSQVNQLKNQNQQLSMALSLTTQNL 82 679****************************************98887766655 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MSSGTSSGSS QGTRSSRSED DLNLQAQMEK KRKRRKESNR ESARRSRMRK QQHLDELTSQ 60 VNQLKNQNQQ LSMALSLTTQ NLVAVQAQNS VLQTQEMELQ SRLCALTDIL MCMNNTSATP 120 TPTIPATTTS ACDIFGASSW NQPPIDLYQY QCF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	35	KKRKRR
2	30	36	KKRKRRK
3	31	36	KRKRRK
4	32	37	RKRRKE
5	44	51	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	1e-06	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM09G05500.1