PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G10570.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ZF-HD
Protein Properties Length: 113aa    MW: 11790 Da    PI: 7.9954
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G10570.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer93.51.8e-291987160
      ZF-HD_dimer  1 kekvrYkeClkNhAaslGghavDGCgEfmpsegee.gt........aaalkCaACgCHRnFHRreveee 60
                     +++vrY eC++NhAas+GghavDGC+Ef+++e+   g+        aaalkCaACgCHR+FHRr +++e
  OGLUM09G10570.1 19 CCGVRYGECRRNHAASTGGHAVDGCREFIAAEDGGgGNstgavgvaAAALKCAACGCHRSFHRRVQVYE 87
                     5789***************************888855599*****99*****************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MMKRLVVLRR REPAVRFSCC GVRYGECRRN HAASTGGHAV DGCREFIAAE DGGGGNSTGA  60
VGVAAAALKC AACGCHRSFH RRVQVYEVAW DDDCASGDTS SSSPSSSSSS SSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.16e-12ZF-HD family protein