PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM09G14460.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 231aa MW: 23821.4 Da PI: 9.4724

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM09G14460.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.8	5e-38	42	98	6	62
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +cprC+s++tkfCyynny++sqPr+fCk+CrryWtkGG+lrnvPvGgg+rk+ +ss OGLUM09G14460.1 42 DPCPRCESRDTKFCYYNNYNTSQPRHFCKSCRRYWTKGGSLRNVPVGGGSRKSSTSS 98 57**************************************************98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MQEAGRRPAP QFAGVDLRRP KGYPAAAQLT PAAEEAAAGV GDPCPRCESR DTKFCYYNNY 60 NTSQPRHFCK SCRRYWTKGG SLRNVPVGGG SRKSSTSSSS SAAAAAASSS SSPSSPAKSP 120 KRSKNSKRRR VSPPPPQPAP APPPPTTADA ADVAAPTAPE ATTKKAPEDL TAAAATQPAV 180 ALGLGVADGG GGGKEHLDTS PFEWPSGCDL GPYWPTGVFA DTDPSLFLNL P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	131	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	5e-26	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM09G14460.1