PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM09G15150.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

C2H2

Protein Properties

Length: 129aa MW: 14280.3 Da PI: 9.2121

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM09G15150.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8e-05	46	66	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C +Cgk F k + ++H +++ OGLUM09G15150.1 46 CRKCGKAFAVKGDWRTHEKNC 66 *****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 129 aa Download sequence
MLRLPCYCCA AGCRNNIDHP RAKPLKDFRT LQTHYKRKHG LKPFLCRKCG KAFAVKGDWR 60 THEKNCGKLW YCLCGSEFKH KRSLKDHARA FGHGHGALGG AAALDDDDDG AVSDLDHDSS 120 STAPAARSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	3e-57	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OGLUM09G15150.1