PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM09G15820.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 358aa MW: 39702.5 Da PI: 9.6124

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM09G15820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.6	8e-56	21	151	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtdeel+++yL++k+++ +++ ++i+evd++k+ePwdLp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+++ OGLUM09G15820.1 21 LPPGFRFHPTDEELITYYLRQKIADGGFTA-RAIAEVDLNKCEPWDLPEKAKMGEKEWYFFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIFT 113 79***********************999.89***********99999************************************9 PP NAM 95 k....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + elvg+kktLvfykgrap+gekt+Wvmheyrl OGLUM09G15820.1 114 GqppaTPELVGMKKTLVFYKGRAPRGEKTNWVMHEYRL 151 766666677*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MAMGMEGSGG GGSAKKKEES LPPGFRFHPT DEELITYYLR QKIADGGFTA RAIAEVDLNK 60 CEPWDLPEKA KMGEKEWYFF SLRDRKYPTG VRTNRATNAG YWKTTGKDKE IFTGQPPATP 120 ELVGMKKTLV FYKGRAPRGE KTNWVMHEYR LHSKSIPKSN KDEWVVCRIF AKTAGVKKYP 180 SNNAHSRSHH PYTLDMVPPL LPALLQQDPF GRGHHPYMNP VDMAELSRFA RGTPGLHPHI 240 QPHPGYINPA TPFTLSGLNL NLGSSPAMPP PPPPPPQSIL QAMSMPMNQP STTNQVMVTE 300 QMIPGLANGV IPQGTDGGFT TDVVVGSTGI RYQNLDVEQL VERSWIVLRC EIVRGIGT

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MAMGMEGSGG GGSAKKKEES LPPGFRFHPT DEELITYYLR QKIADGGFTA RAIAEVDLNK  60
CEPWDLPEKA KMGEKEWYFF SLRDRKYPTG VRTNRATNAG YWKTTGKDKE IFTGQPPATP  120
ELVGMKKTLV FYKGRAPRGE KTNWVMHEYR LHSKSIPKSN KDEWVVCRIF AKTAGVKKYP  180
SNNAHSRSHH PYTLDMVPPL LPALLQQDPF GRGHHPYMNP VDMAELSRFA RGTPGLHPHI  240
QPHPGYINPA TPFTLSGLNL NLGSSPAMPP PPPPPPQSIL QAMSMPMNQP STTNQVMVTE  300
QMIPGLANGV IPQGTDGGFT TDVVVGSTGI RYQNLDVEQL VERSWIVLRC EIVRGIGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	5e-90	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM09G15820.1