PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G16460.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 245aa    MW: 26008.1 Da    PI: 10.1079
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G16460.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM118.47e-3781411128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyat..gkrknratksgyWkatgkdke 91 
                      lppGfrFhPtdeelvv+yL++++ +++l++  vi++v d   ++PwdLp    a++ e yfFs r+ ++a+  g  ++r + sgyWkatg +k+
  OGLUM09G16460.1   8 LPPGFRFHPTDEELVVQYLRRRALSRPLPA-AVIPDVhDAAVLDPWDLP---GAGDGEAYFFSFRQLAAASggGGWRRRRAGSGYWKATGAEKP 97 
                      79****************************.8999999***********...457889*******999986324456666799*********** PP

              NAM  92 vlsk.........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      v+ +         +++lvg+k+tL f +++ p+  +t+Wvmheyrl
  OGLUM09G16460.1  98 VFLRgfgcgggggGQHLVGVKTTLLFLRAKPPS--RTHWVMHEYRL 141
                      ****9999999887888**********666666..*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MATPGQQLPP GFRFHPTDEE LVVQYLRRRA LSRPLPAAVI PDVHDAAVLD PWDLPGAGDG  60
EAYFFSFRQL AAASGGGGWR RRRAGSGYWK ATGAEKPVFL RGFGCGGGGG GQHLVGVKTT  120
LLFLRAKPPS RTHWVMHEYR LAAAGAVAVA AAGQTKRGNH SCMAQPGEWV VCRIFLKNNR  180
SSRRRAGDAD GETPVTGVHG HRRRQPSPSP SSSSCVTAEV SDGEGEEEVS SGSINGAPSA  240
SQREA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-32NAC family protein