PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G17450.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 225aa    MW: 24562.6 Da    PI: 7.6372
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G17450.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.2e-1884130252
              AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkk 52 
                      ++ GVr+++ +grWvAeI+d      +r r +lg+f+taeeAa+a+++a++ 
  OGLUM09G17450.1  84 RFVGVRQRP-SGRWVAEIKD----SaQRVRLWLGTFDTAEEAARAYDEAARF 130
                      589******.7*********....4456*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MWHSGMWGLR GFHADSAATS DKTRTDGQTL GTEIRHLPHT WQRDVERQMA TNTIRSELMA  60
AQESGRMATA TGGVVAAKAR RGRRFVGVRQ RPSGRWVAEI KDSAQRVRLW LGTFDTAEEA  120
ARAYDEAARF ALAAVFRRCM QPAAATRQQC GAADTTVHVK NAVQPSFVVP RRTEAPPPPT  180
TPMLLAEDVL VDFDDDGLGS AGVETAFMVS SSLIVPSSFG IDDDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-08ERF family protein