PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM09G19480.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 219aa MW: 25396.6 Da PI: 7.3004

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM09G19480.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.9	1.2e-54	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppGfrFhPtdeelv++yLk+kv+g +++l ++i+evd+yk+ePw+L+ k + ++++ewyfF +rd+ky++g r+nrat++gyWk+tgkd+++ OGLUM09G19480.1 6 LPPGFRFHPTDEELVNYYLKRKVHGLSIDL-DIIPEVDLYKCEPWELEeKsFLPSKDSEWYFFGPRDRKYPNGCRTNRATRAGYWKSTGKDRRI 98 79**************************.99**********84345566899********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +g+kktLv+ykgrap+g +t+Wvmheyr+ OGLUM09G19480.1 99 NY-QNRSIGMKKTLVYYKGRAPQGIRTSWVMHEYRI 133 9.8899**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MAPVGLPPGF RFHPTDEELV NYYLKRKVHG LSIDLDIIPE VDLYKCEPWE LEEKSFLPSK 60 DSEWYFFGPR DRKYPNGCRT NRATRAGYWK STGKDRRINY QNRSIGMKKT LVYYKGRAPQ 120 GIRTSWVMHE YRIEESECEN AMGIQLQDSY ALCRIFKKNV VLGEFDKKGE CSSSQAKGNE 180 EQVTDFGDAG QSSGANENDK DNSWMQFIAE DLWCTNKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	1e-108	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM09G19480.1