PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM09G20880.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

BES1

Protein Properties

Length: 163aa MW: 18915.1 Da PI: 5.0211

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM09G20880.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	129	5.5e-40	45	132	3	90
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasasp 90 ++r + +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+neV++AL+reAGwvv +DGtt++ +s+ + + + ++ + a+p OGLUM09G20880.1 45 GRRGRAREEKERTKLRERQRRAITARILAGLRRHGNYNLRVRADINEVIAALAREAGWVVLPDGTTFPSSSSVSQPPPTQQQLQAAEP 132 57888899************************************************************77665533333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MQQQQQAMEE DGVKEEEEEY YLEEEDEGEE ETRPPLQQQQ QVGLGRRGRA REEKERTKLR 60 ERQRRAITAR ILAGLRRHGN YNLRVRADIN EVIAALAREA GWVVLPDGTT FPSSSSVSQP 120 PPTQQQLQAA EPELSELEAK YRRVASGFRI QLTEKHMFVW KDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	2e-24	BES1 family protein

Link Out ? help Back to Top
Ensembl	OGLUM09G20880.1